Difference between revisions of "Tiso gene 5999"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-151 RXN1F-151] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Gene == Gene Tiso_gene_18135 == * left end position: ** 84 * transcription direction: ** POSITIVE * right end position: ** 2325 * centisome position: ** 2.6038437...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-151 RXN1F-151] ==
+
== Gene Tiso_gene_18135 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 84
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
+
** POSITIVE
 +
* right end position:
 +
** 2325
 +
* centisome position:
 +
** 2.6038437   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[3.4.25.1-RXN]]
−
** 1 [[CPD1F-126]][c] '''=>''' 1 [[CPD1F-129]][c]
+
** experimental_annotation
−
* With common name(s):
+
***automated-name-match
−
** 1 γ-carotene[c] '''=>''' 1 all-trans-β-carotene[c]
+
== Pathways associated ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_1547]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_4457]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_3577]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_8263]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6282]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_11980]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
== Pathways ==
+
−
* [[PWY-5943]], β-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5943 PWY-5943]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[creinhardtii]]
+
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=84}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32242 32242]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=2325}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03824 R03824]
+
{{#set: centisome position=2.6038437    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=3.4.25.1-RXN}}
−
{{#set: ec number=EC-5.5.1.19}}
+
−
{{#set: gene associated=Tiso_gene_1547|Tiso_gene_4457|Tiso_gene_3577|Tiso_gene_8263|Tiso_gene_6282|Tiso_gene_11980}}
+
−
{{#set: in pathway=PWY-5943}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
+

Revision as of 16:58, 10 January 2018

Gene Tiso_gene_18135

  • left end position:
    • 84
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2325
  • centisome position:
    • 2.6038437
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5999&oldid=11114"