Difference between revisions of "PWY-4661"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-168 RXN1F-168] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-168 RXN1F-168] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** thiolase
 
** acetyl-_c-acetyltransferase
 
** 3-ketoacyl-_thiolase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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** [http://enzyme.expasy.org/EC/1.14.11.12 EC-1.14.11.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CO-A]][c] '''+''' 1 [[CPD-15687]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15688]][c]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-10332]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CPD1F-96]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
** 1 coenzyme A[c] '''+''' 1 5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 3-cis, 5-trans-dodecadienoyl-CoA[c]
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** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 gibberellin44 (open lactone form)[c] '''=>''' 1 succinate[c] '''+''' 1 gibberellin A19[c] '''+''' 1 H2O[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_3855]]
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* [[Tiso_gene_3330]]
** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[athaliana]]
***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3856]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10116]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17451]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15327]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
 
== Pathways  ==
* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340]
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* [[PWY-5035]], gibberellin biosynthesis III (early C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5035 PWY-5035]
** '''3''' reactions found over '''10''' reactions in the full pathway
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
+
* [[orthology]]:
** [[pathwaytools]]:
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** [[pantograph]]:
*** [[experimental_annotation]]
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*** [[athaliana]]
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16033 16033]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07184 R07184]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=thiolase}}
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{{#set: ec number=EC-1.14.11.12}}
{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: gene associated=Tiso_gene_3330}}
{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: in pathway=PWY-5035}}
{{#set: ec number=EC-2.3.1.16}}
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{{#set: reconstruction category=orthology}}
{{#set: gene associated=Tiso_gene_3855|Tiso_gene_3856|Tiso_gene_10116|Tiso_gene_17451|Tiso_gene_15327}}
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{{#set: reconstruction tool=pantograph}}
{{#set: in pathway=PWY-7340}}
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{{#set: reconstruction source=athaliana}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:01, 10 January 2018

Reaction RXN1F-168

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5035, gibberellin biosynthesis III (early C-13 hydroxylation): PWY-5035
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links