Difference between revisions of "Tiso gene 1435"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IPPISOM-RXN IPPISOM-RXN] == * direction: ** REVERSIBLE * common name: ** isopentenyl-diphosphate_de...")
 
(Created page with "Category:Gene == Gene Tiso_gene_14848 == * left end position: ** 63 * transcription direction: ** POSITIVE * right end position: ** 3801 * centisome position: ** 1.1683977...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IPPISOM-RXN IPPISOM-RXN] ==
+
== Gene Tiso_gene_14848 ==
* direction:
+
* left end position:
** REVERSIBLE
+
** 63
* common name:
+
* transcription direction:
** isopentenyl-diphosphate_delta-isomerase
+
** POSITIVE
* ec number:
+
* right end position:
** [http://enzyme.expasy.org/EC/5.3.3.2 EC-5.3.3.2]
+
** 3801
 +
* centisome position:
 +
** 1.1683977   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reactions associated ==
* With identifiers:
+
* [[GLUTATHIONE-SYN-RXN]]
** 1 [[DELTA3-ISOPENTENYL-PP]][c] '''<=>''' 1 [[CPD-4211]][c]
+
** experimental_annotation
* With common name(s):
+
***ec-number
** 1 isopentenyl diphosphate[c] '''<=>''' 1 dimethylallyl diphosphate[c]
+
** [[pantograph]]-[[athaliana]]
 
+
** [[pantograph]]-[[esiliculosus]]
== Genes associated with this reaction  ==
+
** [[pantograph]]-[[creinhardtii]]
Genes have been associated with this reaction based on different elements listed below.
+
== Pathways associated ==
* [[Tiso_gene_8653]]
+
* [[GLUTATHIONESYN-PWY]]
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
== Pathways  ==
+
* [[PWY-6859]], all-trans-farnesol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6859 PWY-6859]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6383]], mono-trans, poly-cis decaprenyl phosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6383 PWY-6383]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
+
** '''6''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-5123]], trans, trans-farnesyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7102]], bisabolene biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102]
+
** '''3''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
+
** '''4''' reactions found over '''8''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[manual]]:
+
** [[primary_network]]
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: left end position=63}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23284 23284]
+
{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
+
{{#set: right end position=3801}}
** [http://www.genome.jp/dbget-bin/www_bget?R01123 R01123]
+
{{#set: centisome position=1.1683977    }}
* UNIPROT:
+
{{#set: reaction associated=GLUTATHIONE-SYN-RXN}}
** [http://www.uniprot.org/uniprot/P15496 P15496]
+
{{#set: pathway associated=GLUTATHIONESYN-PWY}}
** [http://www.uniprot.org/uniprot/Q10132 Q10132]
+
** [http://www.uniprot.org/uniprot/Q38929 Q38929]
+
** [http://www.uniprot.org/uniprot/Q42553 Q42553]
+
** [http://www.uniprot.org/uniprot/P93355 P93355]
+
** [http://www.uniprot.org/uniprot/O81691 O81691]
+
** [http://www.uniprot.org/uniprot/Q9SAY0 Q9SAY0]
+
** [http://www.uniprot.org/uniprot/O81660 O81660]
+
** [http://www.uniprot.org/uniprot/O81659 O81659]
+
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=isopentenyl-diphosphate_delta-isomerase}}
+
{{#set: ec number=EC-5.3.3.2}}
+
{{#set: gene associated=Tiso_gene_8653}}
+
{{#set: in pathway=PWY-6859|PWY-6174|PWY-922|NONMEVIPP-PWY|PWY-6383|PWY-7391|PWY-5123|PWY-7560|PWY-7102|PWY-7524}}
+
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction source=primary_network}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 17:02, 10 January 2018

Gene Tiso_gene_14848

  • left end position:
    • 63
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3801
  • centisome position:
    • 1.1683977
  • Synonym(s):

Reactions associated

Pathways associated

External links