Difference between revisions of "1CMET2-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1141 RXN0-1141] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate--GcvH protein ligas...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14218 RXN-14218] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * Synonym(s): == React...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1141 RXN0-1141] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14218 RXN-14218] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** lipoate--GcvH protein ligase
+
** ORF
** lipoate-protein_ligase_a
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** lipoate-protein_ligase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.1.20 EC-6.3.1.20]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[LIPOIC-ACID]][c] '''+''' 1 [[Gcv-H]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTEIN-LIPOYLLYSINE]][c]
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** 1 [[WATER]][c] '''+''' 1 [[DGDP]][c] '''=>''' 1 [[DGMP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
** 1 (R)-lipoate[c] '''+''' 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c]
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** 1 H2O[c] '''+''' 1 dGDP[c] '''=>''' 1 dGMP[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_17215]]
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* [[Tiso_gene_20236]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_12899]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
***AUTOMATED-NAME-MATCH
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***EC-NUMBER
* [[Tiso_gene_8713]]
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** EXPERIMENTAL_ANNOTATION
** IN-SILICO_ANNOTATION
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***EC-NUMBER
***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4494]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17216]]
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** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4493]]
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** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=lipoate--GcvH protein ligase}}
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{{#set: common name=ORF}}
{{#set: common name=lipoate-protein_ligase_a}}
+
{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
{{#set: common name=lipoate-protein_ligase}}
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{{#set: ec number=EC-6.3.1.20}}
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{{#set: gene associated=Tiso_gene_17215|Tiso_gene_8713|Tiso_gene_4494|Tiso_gene_17216|Tiso_gene_4493}}
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{{#set: in pathway=}}
 
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=in-silico_annotation}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:03, 10 January 2018

Reaction RXN-14218

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 dGDP[c] => 1 dGMP[c] + 1 phosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links