Difference between revisions of "Tiso gene 4332"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPDQT-28 CPDQT-28] == * smiles: ** CSCCCCCC(=O)C([O-])=O * inchi key: ** InChIKey=TWAIOPPFLZEXC...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPDQT-28 CPDQT-28] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] ==
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* smiles:
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* direction:
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** CSCCCCCC(=O)C([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=TWAIOPPFLZEXCO-UHFFFAOYSA-M
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* common name:
 
* common name:
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** 7-(methylthio)-2-oxoheptanoate
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** assimilatory_nitrate_reductase
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* molecular weight:
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** ORF
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** 189.249   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.7.1.1 EC-1.7.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** 7-(methylthio)-2-oxoheptanoic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXNQT-4168]]
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** 1 [[NITRATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[NITRITE]][c]
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* [[RXN-18207]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 nitrate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''=>''' 1 H2O[c] '''+''' 1 NAD+[c] '''+''' 1 nitrite[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16889]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_18918]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
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* [[orthology]]:
 +
** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=44237184 44237184]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17913 17913]
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* KNAPSACK : C00007645
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* LIGAND-RXN:
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{{#set: smiles=CSCCCCCC(=O)C([O-])=O}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
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{{#set: inchi key=InChIKey=TWAIOPPFLZEXCO-UHFFFAOYSA-M}}
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* UNIPROT:
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{{#set: common name=7-(methylthio)-2-oxoheptanoate}}
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** [http://www.uniprot.org/uniprot/Q39607 Q39607]
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{{#set: molecular weight=189.249    }}
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** [http://www.uniprot.org/uniprot/Q41201 Q41201]
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{{#set: common name=7-(methylthio)-2-oxoheptanoic acid}}
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** [http://www.uniprot.org/uniprot/P17569 P17569]
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{{#set: produced by=RXNQT-4168|RXN-18207}}
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** [http://www.uniprot.org/uniprot/P54233 P54233]
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** [http://www.uniprot.org/uniprot/P36841 P36841]
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** [http://www.uniprot.org/uniprot/P27967 P27967]
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** [http://www.uniprot.org/uniprot/P27969 P27969]
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** [http://www.uniprot.org/uniprot/P11035 P11035]
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** [http://www.uniprot.org/uniprot/P08509 P08509]
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** [http://www.uniprot.org/uniprot/P11605 P11605]
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** [http://www.uniprot.org/uniprot/P23312 P23312]
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** [http://www.uniprot.org/uniprot/P17570 P17570]
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** [http://www.uniprot.org/uniprot/P16081 P16081]
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** [http://www.uniprot.org/uniprot/Q01170 Q01170]
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** [http://www.uniprot.org/uniprot/P39865 P39865]
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** [http://www.uniprot.org/uniprot/P11832 P11832]
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** [http://www.uniprot.org/uniprot/P39869 P39869]
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** [http://www.uniprot.org/uniprot/Q43265 Q43265]
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** [http://www.uniprot.org/uniprot/P43101 P43101]
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** [http://www.uniprot.org/uniprot/P43100 P43100]
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** [http://www.uniprot.org/uniprot/Q42497 Q42497]
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** [http://www.uniprot.org/uniprot/P39866 P39866]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=assimilatory_nitrate_reductase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.7.1.1}}
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{{#set: gene associated=Tiso_gene_16889|Tiso_gene_18918}}
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{{#set: in pathway=PWY-381}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:04, 10 January 2018

Reaction NITRATE-REDUCTASE-NADH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • assimilatory_nitrate_reductase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 nitrate[c] + 1 H+[c] + 1 NADH[c] => 1 H2O[c] + 1 NAD+[c] + 1 nitrite[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-381, nitrate reduction II (assimilatory): PWY-381
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links








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