Difference between revisions of "Tiso gene 17632"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2601 RXN0-2601] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidopyrimidine-dna_gly...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17331 CPD-17331] == * smiles: ** CCC=CCC=CCC=CCC=CCC=CCCCCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2601 RXN0-2601] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17331 CPD-17331] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCC=CCC=CCC=CCC=CCC=CCCCCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
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* inchi key:
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** InChIKey=BNAMTMVBOVNNSH-AFQBPCMKSA-J
 
* common name:
 
* common name:
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** formamidopyrimidine-dna_glycosylase
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** (9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA
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** dna_glycosylase
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* molecular weight:
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** dna-(apurinic_or_apyrimidinic_site)_lyase
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** 1104.05   
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.99.18 EC-4.2.99.18]
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* Synonym(s):
 
* Synonym(s):
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** tetracosapentaenoyl-CoA
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** all-cis-9,12,15,18,21-tetracosapentaenoyl-CoA
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** (9Z,12Z,15Z,18Z,21Z)-tetracosa-9,12,15,18,21-pentaenoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-16132]]
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** 1 [[Damaged-DNA-Pyrimidine]][c] '''=>''' 1 [[DNA-containing-a-Apyrimidinic-Sites]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-16131]]
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** 1 a damaged DNA pyrimidine[c] '''=>''' 1 an apyrimidinic site in DNA[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17380]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14609]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16492]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_19077]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_19078]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_11590]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1280]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6558]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16493]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=formamidopyrimidine-dna_glycosylase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71581213 71581213]
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{{#set: common name=dna_glycosylase}}
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* CHEBI:
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{{#set: common name=dna-(apurinic_or_apyrimidinic_site)_lyase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=74083 74083]
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{{#set: ec number=EC-4.2.99.18}}
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{{#set: smiles=CCC=CCC=CCC=CCC=CCC=CCCCCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O}}
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{{#set: gene associated=Tiso_gene_17380|Tiso_gene_14609|Tiso_gene_16492|Tiso_gene_19077|Tiso_gene_19078|Tiso_gene_11590|Tiso_gene_1280|Tiso_gene_6558|Tiso_gene_16493}}
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{{#set: inchi key=InChIKey=BNAMTMVBOVNNSH-AFQBPCMKSA-J}}
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{{#set: in pathway=}}
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{{#set: common name=(9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA}}
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{{#set: reconstruction category=orthology}}
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{{#set: molecular weight=1104.05    }}
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{{#set: reconstruction tool=pantograph}}
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{{#set: common name=tetracosapentaenoyl-CoA|all-cis-9,12,15,18,21-tetracosapentaenoyl-CoA|(9Z,12Z,15Z,18Z,21Z)-tetracosa-9,12,15,18,21-pentaenoyl-CoA}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: consumed by=RXN-16132}}
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{{#set: reconstruction category=annotation}}
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{{#set: produced by=RXN-16131}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:07, 10 January 2018

Metabolite CPD-17331

  • smiles:
    • CCC=CCC=CCC=CCC=CCC=CCCCCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
  • inchi key:
    • InChIKey=BNAMTMVBOVNNSH-AFQBPCMKSA-J
  • common name:
    • (9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA
  • molecular weight:
    • 1104.05
  • Synonym(s):
    • tetracosapentaenoyl-CoA
    • all-cis-9,12,15,18,21-tetracosapentaenoyl-CoA
    • (9Z,12Z,15Z,18Z,21Z)-tetracosa-9,12,15,18,21-pentaenoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCC=CCC=CCC=CCC=CCC=CCCCCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O" cannot be used as a page name in this wiki.




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