Difference between revisions of "PWY-6328"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** gluconeogenesis III
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.4.3 EC-3.5.4.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''10''' reaction(s) found
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* With identifiers:
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** [[F16BDEPHOS-RXN]]
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** 1 [[GUANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[XANTHINE]][c] '''+''' 1 [[AMMONIUM]][c]
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** [[MALATE-DEH-RXN]]
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* With common name(s):
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** [[TRIOSEPISOMERIZATION-RXN]]
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** 1 guanine[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''=>''' 1 xanthine[c] '''+''' 1 ammonium[c]
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** [[RXN-15513]]
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** [[PHOSGLYPHOS-RXN]]
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== Genes associated with this reaction  ==
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** [[PGLUCISOM-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[2PGADEHYDRAT-RXN]]
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* [[Tiso_gene_12280]]
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** [[GAPOXNPHOSPHN-RXN]]
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** IN-SILICO_ANNOTATION
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** [[F16ALDOLASE-RXN]]
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***EC-NUMBER
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** [[PYRUVATE-CARBOXYLASE-RXN]]
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** [[pantograph]]-[[creinhardtii]]
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== Reaction(s) not found ==
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== Pathways  ==
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* '''2''' reaction(s) not found
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* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
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** [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.32-RXN 4.1.1.32-RXN]
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** '''4''' reactions found over '''17''' reactions in the full pathway
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-526 RXN66-526]
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* [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
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** '''7''' reactions found over '''24''' reactions in the full pathway
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* [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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* RHEA:
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{{#set: common name=gluconeogenesis III}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14665 14665]
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{{#set: reaction found=10}}
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* LIGAND-RXN:
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{{#set: reaction not found=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01676 R01676]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.5.4.3}}
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{{#set: gene associated=Tiso_gene_12280}}
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{{#set: in pathway=P164-PWY|PWY-6608|PWY-5497|PWY-6606}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:11, 10 January 2018

Reaction GUANINE-DEAMINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 guanine[c] + 1 H+[c] + 1 H2O[c] => 1 xanthine[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 4 reactions found over 17 reactions in the full pathway
  • PWY-6608, guanosine nucleotides degradation III: PWY-6608
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
    • 7 reactions found over 24 reactions in the full pathway
  • PWY-6606, guanosine nucleotides degradation II: PWY-6606
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6328&oldid=11900"