Difference between revisions of "Tiso gene 8416"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMAMIDASE-RXN FORMAMIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidase * e...")
 
(Created page with "Category:Gene == Gene Tiso_gene_582 == * left end position: ** 23226 * transcription direction: ** POSITIVE * right end position: ** 24586 * centisome position: ** 73.8083...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMAMIDASE-RXN FORMAMIDASE-RXN] ==
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== Gene Tiso_gene_582 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 23226
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* common name:
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* transcription direction:
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** formamidase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.5.1.49 EC-3.5.1.49]
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** 24586
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* centisome position:
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** 73.80831   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[FORMAMIDE]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[AMMONIUM]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 formamide[c] '''=>''' 1 formate[c] '''+''' 1 ammonium[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13559]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_13558]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-7142]], cyanide detoxification II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7142 PWY-7142]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=23226}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21948 21948]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=24586}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00524 R00524]
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{{#set: centisome position=73.80831    }}
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* UNIPROT:
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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** [http://www.uniprot.org/uniprot/Q50228 Q50228]
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** [http://www.uniprot.org/uniprot/Q9SZE9 Q9SZE9]
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** [http://www.uniprot.org/uniprot/Q9SZF0 Q9SZF0]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=formamidase}}
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{{#set: ec number=EC-3.5.1.49}}
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{{#set: gene associated=Tiso_gene_13559|Tiso_gene_13558}}
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{{#set: in pathway=PWY-7142}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:13, 10 January 2018

Gene Tiso_gene_582

  • left end position:
    • 23226
  • transcription direction:
    • POSITIVE
  • right end position:
    • 24586
  • centisome position:
    • 73.80831
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8416&oldid=11978"