Difference between revisions of "Tiso gene 1538"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6660 PWY-6660] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6660 PWY-6660] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)
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** 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis
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** ORF
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** mitochondrial_substrate_carrier_family_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.22 EC-6.1.1.22]
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* Synonym(s):
 
* Synonym(s):
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** 2-heptyl-3,4-dihydroxyquinoline biosynthesis
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** Pseudomonas quinolone signal biosynthesis
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** PQS biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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* '''1''' reaction(s) found
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** 1 [[ATP]][c] '''+''' 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c]
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** [[ANTHRANSYN-RXN]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 ATP[c] '''+''' 1 L-asparagine[c] '''+''' 1 tRNAasn[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-asparaginyl-[tRNAasn][c]
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* '''8''' reaction(s) not found
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** [http://metacyc.org/META/NEW-IMAGE?object=AMINOBENZCOALIG-RXN AMINOBENZCOALIG-RXN]
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== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-11849 RXN-11849]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17709 RXN-17709]
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* [[Tiso_gene_6065]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17708 RXN-17708]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17705 RXN-17705]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17707 RXN-17707]
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** EXPERIMENTAL_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17703 RXN-17703]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17702 RXN-17702]
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* [[Tiso_gene_9304]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13908]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9303]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9908]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11180 11180]
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{{#set: common name=2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis}}
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* LIGAND-RXN:
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{{#set: common name=2-heptyl-3,4-dihydroxyquinoline biosynthesis|Pseudomonas quinolone signal biosynthesis|PQS biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03648 R03648]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: reaction not found=8}}
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** [http://www.uniprot.org/uniprot/P39772 P39772]
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** [http://www.uniprot.org/uniprot/O57980 O57980]
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** [http://www.uniprot.org/uniprot/Q9V251 Q9V251]
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** [http://www.uniprot.org/uniprot/Q9CEK9 Q9CEK9]
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** [http://www.uniprot.org/uniprot/P47359 P47359]
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** [http://www.uniprot.org/uniprot/O51128 O51128]
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** [http://www.uniprot.org/uniprot/O83618 O83618]
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** [http://www.uniprot.org/uniprot/O58008 O58008]
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** [http://www.uniprot.org/uniprot/O96198 O96198]
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** [http://www.uniprot.org/uniprot/P54262 P54262]
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** [http://www.uniprot.org/uniprot/P75521 P75521]
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** [http://www.uniprot.org/uniprot/Q48966 Q48966]
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** [http://www.uniprot.org/uniprot/P0A8M0 P0A8M0]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)}}
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{{#set: common name=ORF}}
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{{#set: common name=mitochondrial_substrate_carrier_family_protein}}
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{{#set: ec number=EC-6.1.1.22}}
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{{#set: gene associated=Tiso_gene_6065|Tiso_gene_9304|Tiso_gene_13908|Tiso_gene_9303|Tiso_gene_9908}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:13, 10 January 2018

Pathway PWY-6660

  • taxonomic range:
  • common name:
    • 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis
  • Synonym(s):
    • 2-heptyl-3,4-dihydroxyquinoline biosynthesis
    • Pseudomonas quinolone signal biosynthesis
    • PQS biosynthesis

Reaction(s) found

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1538&oldid=12014"