Difference between revisions of "RIBOKIN-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7414 CPD-7414] == * smiles: ** CC(=CC=CC=C(C)C=CC=C(C)C=CC1(C(C)(C)CCC=C(C)1))C=CC=C(C)C=CC...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7414 CPD-7414] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] ==
−
* smiles:
+
* direction:
−
** CC(=CC=CC=C(C)C=CC=C(C)C=CC1(C(C)(C)CCC=C(C)1))C=CC=C(C)C=CC2(C(C)=CCCC(C)(C)2)
+
** LEFT-TO-RIGHT
−
* inchi key:
+
* ec number:
−
** InChIKey=QABFXOMOOYWZLZ-GDBZIMIPSA-N
+
** [http://enzyme.expasy.org/EC/4.1.1.25 EC-4.1.1.25]
−
* common name:
+
−
** ε-carotene
+
−
* molecular weight:
+
−
** 536.882   
+
 
* Synonym(s):
 
* Synonym(s):
−
** ε,ε-carotene
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN-8028]]
+
** 1 [[PROTON]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[TYRAMINE]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 H+[c] '''+''' 1 L-tyrosine[c] '''=>''' 1 CO2[c] '''+''' 1 tyramine[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_3686]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
 +
** '''3''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6133]], (S)-reticuline biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6133 PWY-6133]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5254]], methanofuran biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5254 PWY-5254]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7826]], Amaryllidacea alkaloids biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7826 PWY-7826]
 +
** '''2''' reactions found over '''25''' reactions in the full pathway
 +
* [[PWY-7297]], octopamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7297 PWY-7297]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5474]], hydroxycinnamic acid tyramine amides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5474 PWY-5474]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6802]], salidroside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6802 PWY-6802]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=12358808 12358808]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14345 14345]
−
* LIGAND-CPD:
+
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?C16276 C16276]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00736 R00736]
−
{{#set: smiles=CC(=CC=CC=C(C)C=CC=C(C)C=CC1(C(C)(C)CCC=C(C)1))C=CC=C(C)C=CC2(C(C)=CCCC(C)(C)2)}}
+
* UNIPROT:
−
{{#set: inchi key=InChIKey=QABFXOMOOYWZLZ-GDBZIMIPSA-N}}
+
** [http://www.uniprot.org/uniprot/Q06086 Q06086]
−
{{#set: common name=ε-carotene}}
+
** [http://www.uniprot.org/uniprot/P54768 P54768]
−
{{#set: molecular weight=536.882    }}
+
** [http://www.uniprot.org/uniprot/P54769 P54769]
−
{{#set: common name=ε,ε-carotene}}
+
** [http://www.uniprot.org/uniprot/P54770 P54770]
−
{{#set: produced by=RXN-8028}}
+
** [http://www.uniprot.org/uniprot/O82417 O82417]
 +
** [http://www.uniprot.org/uniprot/P54771 P54771]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-4.1.1.25}}
 +
{{#set: gene associated=Tiso_gene_3686}}
 +
{{#set: in pathway=PWY-3581|PWY-6133|PWY-5254|PWY-7826|PWY-7297|PWY-5474|PWY-6802}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}

Revision as of 16:16, 10 January 2018

Reaction TYROSINE-DECARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 L-tyrosine[c] => 1 CO2[c] + 1 tyramine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3581, (S)-reticuline biosynthesis I: PWY-3581
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-6133, (S)-reticuline biosynthesis II: PWY-6133
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5254, methanofuran biosynthesis: PWY-5254
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7826, Amaryllidacea alkaloids biosynthesis: PWY-7826
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-7297, octopamine biosynthesis: PWY-7297
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5474, hydroxycinnamic acid tyramine amides biosynthesis: PWY-5474
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6802, salidroside biosynthesis: PWY-6802
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RIBOKIN-PWY&oldid=12222"