Difference between revisions of "Resolution-of-Recombinational-Junction"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=cis-delta11-melissoyl-ACPs cis-delta11-melissoyl-ACPs] == * common name: ** a cis-delta11-C30:1...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** ornithine_cyclodeaminase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/4.3.1.12 EC-4.3.1.12] | ||
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | == | + | ** 1 [[L-ORNITHINE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[AMMONIUM]][c] |
| − | * [[ | + | * With common name(s): |
| − | == | + | ** 1 L-ornithine[c] '''=>''' 1 L-proline[c] '''+''' 1 ammonium[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[Tiso_gene_1843]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
| + | ** [[pantograph]]-[[esiliculosus]] | ||
| + | * [[Tiso_gene_17134]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
| + | ** [[pantograph]]-[[esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[ORN-AMINOPENTANOATE-CAT-PWY]], L-ornithine degradation I (L-proline biosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=ORN-AMINOPENTANOATE-CAT-PWY ORN-AMINOPENTANOATE-CAT-PWY] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * [[orthology]]: | ||
| + | ** [[pantograph]]: | ||
| + | *** [[esiliculosus]] | ||
| + | * [[annotation]]: | ||
| + | ** [[pathwaytools]]: | ||
| + | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24368 24368] |
| − | {{#set: | + | * LIGAND-RXN: |
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00671 R00671] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/Q59701 Q59701] | ||
| + | ** [http://www.uniprot.org/uniprot/P09773 P09773] | ||
| + | ** [http://www.uniprot.org/uniprot/P33728 P33728] | ||
| + | ** [http://www.uniprot.org/uniprot/O68052 O68052] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9WWA2 Q9WWA2] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=ornithine_cyclodeaminase}} | ||
| + | {{#set: ec number=EC-4.3.1.12}} | ||
| + | {{#set: gene associated=Tiso_gene_1843|Tiso_gene_17134}} | ||
| + | {{#set: in pathway=ORN-AMINOPENTANOATE-CAT-PWY|ARG-GLU-PWY}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
| + | {{#set: reconstruction source=esiliculosus}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
| + | {{#set: reconstruction source=in-silico_annotation}} | ||
Revision as of 17:19, 10 January 2018
Contents
Reaction ORNITHINE-CYCLODEAMINASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- ornithine_cyclodeaminase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-ORNITHINE[c] => 1 PRO[c] + 1 AMMONIUM[c]
- With common name(s):
- 1 L-ornithine[c] => 1 L-proline[c] + 1 ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_1843
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
- Tiso_gene_17134
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
Pathways
- ORN-AMINOPENTANOATE-CAT-PWY, L-ornithine degradation I (L-proline biosynthesis): ORN-AMINOPENTANOATE-CAT-PWY
- 1 reactions found over 1 reactions in the full pathway
- ARG-GLU-PWY, L-arginine degradation VII (arginase 3 pathway): ARG-GLU-PWY
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
External links
