Difference between revisions of "RXN1G-248"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HCO3 HCO3] == * smiles: ** C([O-])(=O)O * inchi key: ** InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HCO3 HCO3] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] ==
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* smiles:
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* direction:
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** C([O-])(=O)O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M
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* common name:
 
* common name:
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** hydrogencarbonate
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** leucine--trna_ligase
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* molecular weight:
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** ORF
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** 61.017   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.4 EC-6.1.1.4]
 
* Synonym(s):
 
* Synonym(s):
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** carbonate
 
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** CO3-2
 
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** CO32-
 
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** HCO3-
 
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** HCO3
 
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** bicarbonate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[CARBPSYN-RXN]]
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* With identifiers:
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* [[RXN1G-4355]]
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** 1 [[ATP]][c] '''+''' 1 [[LEU-tRNAs]][c] '''+''' 1 [[LEU]][c] '''=>''' 1 [[Charged-LEU-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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* With common name(s):
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* [[RXN-16909]]
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** 1 ATP[c] '''+''' 1 a tRNAleu[c] '''+''' 1 L-leucine[c] '''=>''' 1 an L-leucyl-[tRNAleu][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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* [[PCr]]
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* [[R524-RXN]]
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== Genes associated with this reaction  ==
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* [[RXN-13202]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12893]]
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* [[Tiso_gene_11524]]
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* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
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** IN-SILICO_ANNOTATION
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* [[BIOTIN-CARBOXYL-RXN]]
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***EC-NUMBER
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* [[RXN0-742]]
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** EXPERIMENTAL_ANNOTATION
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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***EC-NUMBER
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== Reaction(s) known to produce the compound ==
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** [[pantograph]]-[[esiliculosus]]
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* [[1.2.1.27-RXN]]
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* [[Tiso_gene_15439]]
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* [[RXN-11213]]
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** IN-SILICO_ANNOTATION
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== Reaction(s) of unknown directionality ==
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***EC-NUMBER
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* [[RXN0-5224]]
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** EXPERIMENTAL_ANNOTATION
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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***EC-NUMBER
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* [[RXN-18032]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-18031]]
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== Pathways  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* CAS : 71-52-3
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* RHEA:
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* CAS : 144-55-8
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11688 11688]
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* METABOLIGHTS : MTBLC17544
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R03657 R03657]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=769 769]
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* UNIPROT:
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* HMDB : HMDB00595
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** [http://www.uniprot.org/uniprot/O27552 O27552]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P56457 P56457]
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** [http://www.genome.jp/dbget-bin/www_bget?C00288 C00288]
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** [http://www.uniprot.org/uniprot/O51267 O51267]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/O83595 O83595]
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** [http://www.chemspider.com/Chemical-Structure.749.html 749]
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** [http://www.uniprot.org/uniprot/O84211 O84211]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9Z930 Q9Z930]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17544 17544]
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** [http://www.uniprot.org/uniprot/P47508 P47508]
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* BIGG : hco3
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** [http://www.uniprot.org/uniprot/P36430 P36430]
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{{#set: smiles=C([O-])(=O)O}}
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** [http://www.uniprot.org/uniprot/O66680 O66680]
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{{#set: inchi key=InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M}}
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** [http://www.uniprot.org/uniprot/O67646 O67646]
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{{#set: common name=hydrogencarbonate}}
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** [http://www.uniprot.org/uniprot/Q9ZDB1 Q9ZDB1]
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{{#set: molecular weight=61.017    }}
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** [http://www.uniprot.org/uniprot/Q9WY15 Q9WY15]
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{{#set: common name=carbonate|CO3-2|CO32-|HCO3-|HCO3|bicarbonate}}
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** [http://www.uniprot.org/uniprot/Q9PNK3 Q9PNK3]
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{{#set: consumed by=CARBPSYN-RXN|RXN1G-4355|ACETYL-COA-CARBOXYLTRANSFER-RXN|RXN-16909|PCr|R524-RXN|RXN-13202|RXN-12893|METHYLCROTONYL-COA-CARBOXYLASE-RXN|BIOTIN-CARBOXYL-RXN|RXN0-742|PYRUVATE-CARBOXYLASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JW39 Q9JW39]
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{{#set: produced by=1.2.1.27-RXN|RXN-11213}}
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** [http://www.uniprot.org/uniprot/Q9ZJ63 Q9ZJ63]
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{{#set: consumed or produced by=RXN0-5224|PROPIONYL-COA-CARBOXY-RXN|RXN-18032|RXN-18031}}
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** [http://www.uniprot.org/uniprot/Q9JXT2 Q9JXT2]
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** [http://www.uniprot.org/uniprot/P43827 P43827]
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** [http://www.uniprot.org/uniprot/O58698 O58698]
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** [http://www.uniprot.org/uniprot/Q9CHB6 Q9CHB6]
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** [http://www.uniprot.org/uniprot/P26637 P26637]
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** [http://www.uniprot.org/uniprot/P75398 P75398]
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** [http://www.uniprot.org/uniprot/P73274 P73274]
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** [http://www.uniprot.org/uniprot/Q48955 Q48955]
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** [http://www.uniprot.org/uniprot/Q48964 Q48964]
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** [http://www.uniprot.org/uniprot/Q49051 Q49051]
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** [http://www.uniprot.org/uniprot/P11325 P11325]
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** [http://www.uniprot.org/uniprot/P07813 P07813]
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** [http://www.uniprot.org/uniprot/P10857 P10857]
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** [http://www.uniprot.org/uniprot/P15181 P15181]
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** [http://www.uniprot.org/uniprot/Q50192 Q50192]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=leucine--trna_ligase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-6.1.1.4}}
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{{#set: gene associated=Tiso_gene_11524|Tiso_gene_15439}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:19, 10 January 2018

Reaction LEUCINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • leucine--trna_ligase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 a tRNAleu[c] + 1 L-leucine[c] => 1 an L-leucyl-[tRNAleu][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







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