Difference between revisions of "Tiso gene 4505"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2PGADEHYDRAT-RXN 2PGADEHYDRAT-RXN] == * direction: ** REVERSIBLE * common name: ** bifunctional_eno...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2PGADEHYDRAT-RXN 2PGADEHYDRAT-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
** REVERSIBLE
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** stearate biosynthesis II (bacteria and plants)
+
** bifunctional_enolase2transcriptionalactivator
 +
** bifunctional_enolase_2_transcriptional_activator
 +
** enolase_1
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.11 EC-4.2.1.11]
 
* Synonym(s):
 
* Synonym(s):
−
** stearic acid biosynthesis
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''5''' reaction(s) found
+
* With identifiers:
−
** [[RXN-16380]]
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** 1 [[2-PG]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c]
−
** [[RXN-9632]]
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* With common name(s):
−
** [[RXN-9635]]
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** 1 2-phospho-D-glycerate[c] '''<=>''' 1 H2O[c] '''+''' 1 phosphoenolpyruvate[c]
−
** [[RXN-9633]]
+
 
−
** [[RXN-9634]]
+
== Genes associated with this reaction  ==
−
== Reaction(s) not found ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* '''1''' reaction(s) not found
+
* [[Tiso_gene_13317]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-9548 RXN-9548]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_8720]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_5619]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_14718]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
== Pathways  ==
 +
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-1622]], formaldehyde assimilation I (serine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
 +
** '''12''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-6901]], superpathway of glucose and xylose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901]
 +
** '''8''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 +
* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=NPGLUCAT-PWY NPGLUCAT-PWY]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 +
** '''11''' reactions found over '''15''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
 +
** '''8''' reactions found over '''14''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
 +
** '''11''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7124]], ethylene biosynthesis V (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7124 PWY-7124]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886]
 +
** '''8''' reactions found over '''11''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7003]], glycerol degradation to butanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003]
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[synechocystis]]
 +
*** [[athaliana]]
 +
*** [[esiliculosus]]
 +
* [[manual]]:
 +
** [[primary_network]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33090}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-2}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10164 10164]
−
{{#set: common name=stearate biosynthesis II (bacteria and plants)}}
+
* LIGAND-RXN:
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{{#set: common name=stearic acid biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00658 R00658]
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{{#set: reaction found=5}}
+
* UNIPROT:
−
{{#set: reaction not found=1}}
+
** [http://www.uniprot.org/uniprot/P04764 P04764]
 +
** [http://www.uniprot.org/uniprot/P07322 P07322]
 +
** [http://www.uniprot.org/uniprot/P07323 P07323]
 +
** [http://www.uniprot.org/uniprot/P06733 P06733]
 +
** [http://www.uniprot.org/uniprot/P19140 P19140]
 +
** [http://www.uniprot.org/uniprot/P25704 P25704]
 +
** [http://www.uniprot.org/uniprot/P30575 P30575]
 +
** [http://www.uniprot.org/uniprot/P33675 P33675]
 +
** [http://www.uniprot.org/uniprot/P47647 P47647]
 +
** [http://www.uniprot.org/uniprot/Q9JU46 Q9JU46]
 +
** [http://www.uniprot.org/uniprot/P37869 P37869]
 +
** [http://www.uniprot.org/uniprot/Q9URB2 Q9URB2]
 +
** [http://www.uniprot.org/uniprot/Q9CIT0 Q9CIT0]
 +
** [http://www.uniprot.org/uniprot/Q9CHS7 Q9CHS7]
 +
** [http://www.uniprot.org/uniprot/P43806 P43806]
 +
** [http://www.uniprot.org/uniprot/P42448 P42448]
 +
** [http://www.uniprot.org/uniprot/P42848 P42848]
 +
** [http://www.uniprot.org/uniprot/Q05524 Q05524]
 +
** [http://www.uniprot.org/uniprot/P42897 P42897]
 +
** [http://www.uniprot.org/uniprot/P40370 P40370]
 +
** [http://www.uniprot.org/uniprot/P51913 P51913]
 +
** [http://www.uniprot.org/uniprot/P26300 P26300]
 +
** [http://www.uniprot.org/uniprot/Q42887 Q42887]
 +
** [http://www.uniprot.org/uniprot/P25696 P25696]
 +
** [http://www.uniprot.org/uniprot/P00924 P00924]
 +
** [http://www.uniprot.org/uniprot/P00925 P00925]
 +
** [http://www.uniprot.org/uniprot/P0A6P9 P0A6P9]
 +
** [http://www.uniprot.org/uniprot/P29201 P29201]
 +
** [http://www.uniprot.org/uniprot/P09104 P09104]
 +
** [http://www.uniprot.org/uniprot/P21550 P21550]
 +
** [http://www.uniprot.org/uniprot/P08734 P08734]
 +
** [http://www.uniprot.org/uniprot/Q7M4Y6 Q7M4Y6]
 +
** [http://www.uniprot.org/uniprot/P15429 P15429]
 +
** [http://www.uniprot.org/uniprot/P13929 P13929]
 +
** [http://www.uniprot.org/uniprot/P15007 P15007]
 +
** [http://www.uniprot.org/uniprot/P17182 P17182]
 +
** [http://www.uniprot.org/uniprot/P17183 P17183]
 +
** [http://www.uniprot.org/uniprot/P26301 P26301]
 +
** [http://www.uniprot.org/uniprot/P31683 P31683]
 +
** [http://www.uniprot.org/uniprot/Q54274 Q54274]
 +
** [http://www.uniprot.org/uniprot/P42896 P42896]
 +
** [http://www.uniprot.org/uniprot/Q27727 Q27727]
 +
** [http://www.uniprot.org/uniprot/Q9UWJ5 Q9UWJ5]
 +
** [http://www.uniprot.org/uniprot/P48285 P48285]
 +
** [http://www.uniprot.org/uniprot/Q12007 Q12007]
 +
** [http://www.uniprot.org/uniprot/P42222 P42222]
 +
** [http://www.uniprot.org/uniprot/P75189 P75189]
 +
** [http://www.uniprot.org/uniprot/P77972 P77972]
 +
** [http://www.uniprot.org/uniprot/Q49059 Q49059]
 +
** [http://www.uniprot.org/uniprot/P42895 P42895]
 +
** [http://www.uniprot.org/uniprot/Q42971 Q42971]
 +
** [http://www.uniprot.org/uniprot/Q43130 Q43130]
 +
** [http://www.uniprot.org/uniprot/O69174 O69174]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=bifunctional_enolase2transcriptionalactivator}}
 +
{{#set: common name=bifunctional_enolase_2_transcriptional_activator}}
 +
{{#set: common name=enolase_1}}
 +
{{#set: ec number=EC-4.2.1.11}}
 +
{{#set: gene associated=Tiso_gene_13317|Tiso_gene_8720|Tiso_gene_5619|Tiso_gene_14718}}
 +
{{#set: in pathway=PWY-1042|P341-PWY|PWY-2221|PWY-1622|PWY66-399|GLYCOLYSIS|PWY-6901|PWY-7218|NPGLUCAT-PWY|P124-PWY|ANAGLYCOLYSIS-PWY|PWY-5723|PWY-6142|GLUCONEO-PWY|PWY-5484|PWY-7124|PWY-6886|P122-PWY|PWY-7003}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:20, 10 January 2018

Reaction 2PGADEHYDRAT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • bifunctional_enolase2transcriptionalactivator
    • bifunctional_enolase_2_transcriptional_activator
    • enolase_1
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-phospho-D-glycerate[c] <=> 1 H2O[c] + 1 phosphoenolpyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1042, glycolysis IV (plant cytosol): PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • P341-PWY, glycolysis V (Pyrococcus): P341-PWY
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2221, Entner-Doudoroff pathway III (semi-phosphorylative): PWY-2221
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-1622, formaldehyde assimilation I (serine pathway): PWY-1622
    • 5 reactions found over 13 reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 10 reactions found over 12 reactions in the full pathway
  • GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
    • 12 reactions found over 12 reactions in the full pathway
  • PWY-6901, superpathway of glucose and xylose degradation: PWY-6901
    • 8 reactions found over 12 reactions in the full pathway
  • PWY-7218, photosynthetic 3-hydroxybutanoate biosynthesis (engineered): PWY-7218
    • 7 reactions found over 10 reactions in the full pathway
  • NPGLUCAT-PWY, Entner-Doudoroff pathway II (non-phosphorylative): NPGLUCAT-PWY
    • 4 reactions found over 9 reactions in the full pathway
  • P124-PWY, Bifidobacterium shunt: P124-PWY
    • 11 reactions found over 15 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-5723, Rubisco shunt: PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 8 reactions found over 14 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
    • 11 reactions found over 11 reactions in the full pathway
  • PWY-7124, ethylene biosynthesis V (engineered): PWY-7124
    • 7 reactions found over 10 reactions in the full pathway
  • PWY-6886, 1-butanol autotrophic biosynthesis (engineered): PWY-6886
    • 8 reactions found over 11 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway
  • PWY-7003, glycerol degradation to butanol: PWY-7003
    • 8 reactions found over 10 reactions in the full pathway

Reconstruction information

External links








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