Difference between revisions of "CPD-12179"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FRUCTOKINASE-RXN FRUCTOKINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hexokinase *...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMMONIUM AMMONIUM] == * smiles: ** [NH4+] * inchi key: ** InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FRUCTOKINASE-RXN FRUCTOKINASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMMONIUM AMMONIUM] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** [NH4+]
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* inchi key:
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** InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O
 
* common name:
 
* common name:
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** hexokinase
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** ammonium
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.7.1.4 EC-2.7.1.4]
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** 18.038   
 
* Synonym(s):
 
* Synonym(s):
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** NH4+
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[GLUTAMINESYN-RXN]]
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** 1 [[BETA-D-FRUCTOSE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FRUCTOSE-6P]][c]
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* [[DIPHTINE--AMMONIA-LIGASE-RXN]]
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* With common name(s):
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* [[6.3.4.16-RXN]]
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** 1 β-D-fructofuranose[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 β-D-fructofuranose 6-phosphate[c]
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* [[ASNSYNA-RXN]]
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* [[RXN-13202]]
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== Genes associated with this reaction  ==
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* [[GMP-SYN-NH3-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-9615]]
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* [[Tiso_gene_17974]]
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* [[RXN-16910]]
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** [[pantograph]]-[[athaliana]]
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* [[RXN-14325]]
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** [[pantograph]]-[[creinhardtii]]
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* [[RXN-12093]]
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** [[pantograph]]-[[creinhardtii]]
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== Reaction(s) known to produce the compound ==
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* [[Tiso_gene_1303]]
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* [[HOMOSERDEAM-RXN]]
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** [[pantograph]]-[[creinhardtii]]
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* [[RXN0-5222]]
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** [[pantograph]]-[[creinhardtii]]
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* [[GMP-REDUCT-RXN]]
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* [[Tiso_gene_3107]]
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* [[DCMP-DEAMINASE-RXN]]
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** IN-SILICO_ANNOTATION
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* [[RXN-5821]]
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***AUTOMATED-NAME-MATCH
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* [[RXNN-404]]
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** EXPERIMENTAL_ANNOTATION
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* [[GLUTAMIN-RXN]]
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***AUTOMATED-NAME-MATCH
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* [[RXN-18229]]
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** [[pantograph]]-[[athaliana]]
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* [[ADENODEAMIN-RXN]]
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** [[pantograph]]-[[creinhardtii]]
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* [[AMP-DEAMINASE-RXN]]
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** [[pantograph]]-[[creinhardtii]]
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* [[RXN-9600]]
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== Pathways  ==
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* [[PYRAZIN-RXN]]
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* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5384 PWY-5384]
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* [[PROTEIN-ARGININE-DEIMINASE-RXN]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[RXN-11784]]
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* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
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* [[R311-RXN]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[LCYSDESULF-RXN]]
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* [[SUCUTIL-PWY]], sucrose degradation I (sucrose phosphotransferase): [http://metacyc.org/META/NEW-IMAGE?object=SUCUTIL-PWY SUCUTIL-PWY]
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* [[AMACETOXID-RXN]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[RXN-15261]]
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* [[SUCROSEUTIL2-PWY]], sucrose degradation VII (sucrose 3-dehydrogenase): [http://metacyc.org/META/NEW-IMAGE?object=SUCROSEUTIL2-PWY SUCROSEUTIL2-PWY]
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* [[CYSTHIOCYS-RXN]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[RXN-12878]]
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* [[PWY-4101]], D-sorbitol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4101 PWY-4101]
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* [[RXN-6381]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[RXN0-1081]]
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* [[PWY-6531]], mannitol cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6531 PWY-6531]
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* [[RXN-9615]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[GUANINE-DEAMINASE-RXN]]
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* [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801]
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* [[PMPOXI-RXN]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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* [[RXN-10058]]
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** '''14''' reactions found over '''18''' reactions in the full pathway
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* [[CYTIDEAM2-RXN]]
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== Reconstruction information  ==
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* [[RIBOFLAVINSYNDEAM-RXN]]
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* [[orthology]]:
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* [[AMINEOXID-RXN]]
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** [[pantograph]]:
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* [[RXN-646]]
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*** [[creinhardtii]]
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* [[CYSTATHIONINE-BETA-LYASE-RXN]]
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*** [[athaliana]]
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* [[4.1.99.4-RXN]]
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* [[annotation]]:
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* [[RXN-12893]]
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** [[pathwaytools]]:
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* [[ORNITHINE-CYCLODEAMINASE-RXN]]
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*** [[experimental_annotation]]
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* [[ASPARAGHYD-RXN]]
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*** [[in-silico_annotation]]
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* [[THREDEHYD-RXN]]
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* [[RXN-1404]]
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* [[OHMETHYLBILANESYN-RXN]]
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* [[RXN6666-4]]
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* [[RXN-9597]]
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* [[METBALT-RXN]]
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* [[AMINEPHEN-RXN]]
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* [[1.4.3.19-RXN]]
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* [[RXN-15127]]
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* [[RXN-15130]]
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* [[RXN-15123]]
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* [[RXN-8899]]
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* [[RXN-12729]]
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* [[4.3.1.17-RXN]]
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* [[FORMAMIDASE-RXN]]
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* [[GUANIDINOBUTANAMIDE-NH3-RXN]]
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* [[ADDALT-RXN]]
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== Reaction(s) of unknown directionality ==
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* [[UREASE-RXN]]
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* [[3.5.5.1-RXN]]
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* [[RXN-17608]]
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* [[GLUTAMATE-DEHYDROGENASE-RXN]]
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* [[ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN]]
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* [[RXN-14727]]
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* [[GLYCINE-DEHYDROGENASE-RXN]]
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* [[RXN-17607]]
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* [[GLUTAMINYL-PEPTIDE-CYCLOTRANSFERASE-RXN]]
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* [[RXN-14728]]
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* [[AMIDASE-RXN]]
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* [[GCVT-RXN]]
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* [[GLUTDEHYD-RXN]]
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* [[RXN-11811]]
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* [[CARBAMATE-KINASE-RXN]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 14798-03-9
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16125 16125]
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* METABOLIGHTS : MTBLC28938
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R00760 R00760]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=223 223]
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* UNIPROT:
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* HMDB : HMDB41827
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** [http://www.uniprot.org/uniprot/Q09124 Q09124]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P24261 P24261]
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** [http://www.genome.jp/dbget-bin/www_bget?C01342 C01342]
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** [http://www.uniprot.org/uniprot/Q03417 Q03417]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9V0T7 Q9V0T7]
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** [http://www.chemspider.com/Chemical-Structure.218.html 218]
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** [http://www.uniprot.org/uniprot/Q9CFI9 Q9CFI9]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P22824 P22824]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=28938 28938]
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** [http://www.uniprot.org/uniprot/P26420 P26420]
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* BIGG : nh4
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** [http://www.uniprot.org/uniprot/P26984 P26984]
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{{#set: smiles=[NH4+]}}
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** [http://www.uniprot.org/uniprot/P37829 P37829]
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{{#set: inchi key=InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O}}
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** [http://www.uniprot.org/uniprot/P43468 P43468]
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{{#set: common name=ammonium}}
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** [http://www.uniprot.org/uniprot/P73521 P73521]
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{{#set: molecular weight=18.038    }}
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** [http://www.uniprot.org/uniprot/O82616 O82616]
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{{#set: common name=NH4+}}
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** [http://www.uniprot.org/uniprot/O04897 O04897]
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{{#set: consumed by=GLUTAMINESYN-RXN|DIPHTINE--AMMONIA-LIGASE-RXN|6.3.4.16-RXN|ASNSYNA-RXN|RXN-13202|GMP-SYN-NH3-RXN|RXN-9615|RXN-16910|RXN-14325|RXN-12093}}
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** [http://www.uniprot.org/uniprot/Q42645 Q42645]
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{{#set: produced by=HOMOSERDEAM-RXN|RXN0-5222|GMP-REDUCT-RXN|DCMP-DEAMINASE-RXN|RXN-5821|RXNN-404|GLUTAMIN-RXN|RXN-18229|ADENODEAMIN-RXN|AMP-DEAMINASE-RXN|RXN-9600|PYRAZIN-RXN|PROTEIN-ARGININE-DEIMINASE-RXN|RXN-11784|R311-RXN|LCYSDESULF-RXN|AMACETOXID-RXN|RXN-15261|CYSTHIOCYS-RXN|RXN-12878|RXN-6381|RXN0-1081|RXN-9615|GUANINE-DEAMINASE-RXN|PMPOXI-RXN|FERREDOXIN--NITRITE-REDUCTASE-RXN|RXN-10058|CYTIDEAM2-RXN|RIBOFLAVINSYNDEAM-RXN|AMINEOXID-RXN|RXN-646|CYSTATHIONINE-BETA-LYASE-RXN|4.1.99.4-RXN|RXN-12893|ORNITHINE-CYCLODEAMINASE-RXN|ASPARAGHYD-RXN|THREDEHYD-RXN|RXN-1404|OHMETHYLBILANESYN-RXN|RXN6666-4|RXN-9597|METBALT-RXN|AMINEPHEN-RXN|1.4.3.19-RXN|RXN-15127|RXN-15130|RXN-15123|RXN-8899|RXN-12729|4.3.1.17-RXN|FORMAMIDASE-RXN|GUANIDINOBUTANAMIDE-NH3-RXN|ADDALT-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: consumed or produced by=UREASE-RXN|3.5.5.1-RXN|RXN-17608|GLUTAMATE-DEHYDROGENASE-RXN|ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN|RXN-14727|GLYCINE-DEHYDROGENASE-RXN|RXN-17607|GLUTAMINYL-PEPTIDE-CYCLOTRANSFERASE-RXN|RXN-14728|AMIDASE-RXN|GCVT-RXN|GLUTDEHYD-RXN|RXN-11811|CARBAMATE-KINASE-RXN}}
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{{#set: common name=hexokinase}}
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−
{{#set: ec number=EC-2.7.1.4}}
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{{#set: gene associated=Tiso_gene_17974|Tiso_gene_1303|Tiso_gene_3107}}
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{{#set: in pathway=PWY-5384|PWY-621|SUCUTIL-PWY|SUCROSEUTIL2-PWY|PWY-4101|PWY-6531|PWY-3801|P122-PWY}}
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−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|athaliana}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 17:22, 10 January 2018

Metabolite AMMONIUM

  • smiles:
    • [NH4+]
  • inchi key:
    • InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O
  • common name:
    • ammonium
  • molecular weight:
    • 18.038
  • Synonym(s):
    • NH4+

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 14798-03-9
  • METABOLIGHTS : MTBLC28938
  • PUBCHEM:
  • HMDB : HMDB41827
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : nh4





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