Difference between revisions of "LL-DIAMINOPIMELATE"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=URACIL URACIL] == * smiles: ** C1(=CC(NC(=O)N1)=O) * inchi key: ** InChIKey=ISAKRJDGNUQOIC-UHFF...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8675 RXN-8675] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** uroporphyrinogen methyltransfe...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=URACIL URACIL] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8675 RXN-8675] ==
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* smiles:
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* direction:
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** C1(=CC(NC(=O)N1)=O)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ISAKRJDGNUQOIC-UHFFFAOYSA-N
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* common name:
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** uracil
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* molecular weight:
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** 112.088   
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* Synonym(s):
 
* Synonym(s):
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** U
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** uroporphyrinogen methyltransferase
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** uroporphyrinogen-III methyltransferase
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** adenosylmethionine-uroporphyrinogen III methyltransferase
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** S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase
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** SirA
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** CysG
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** uroporphyrin-III C-methyltransferase (incorrect)
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** S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[URACIL-PRIBOSYLTRANS-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-9038]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIHYDROSIROHYDROCHLORIN]][c]
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* [[URIDINE-NUCLEOSIDASE-RXN]]
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* With common name(s):
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* [[RXN0-2584]]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 precorrin-1[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 precorrin-2[c]
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== Reaction(s) of unknown directionality ==
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* [[URANA1t]]
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== Genes associated with this reaction  ==
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* [[URPHOS-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[URA-PHOSPH-RXN]]
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* [[Tiso_gene_8614]]
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* [[RXN0-5398]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7376]], cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7376 PWY-7376]
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** '''2''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7377 PWY-7377]
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** '''3''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-5194]], siroheme biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5194 PWY-5194]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5196]], factor 430 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5196 PWY-5196]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
 
== External links  ==
 
== External links  ==
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* CAS : 66-22-8
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* RHEA:
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* METABOLIGHTS : MTBLC17568
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21972 21972]
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* DRUGBANK : DB03419
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R07238 R07238]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=1174 1174]
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{{#set: direction=LEFT-TO-RIGHT}}
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* HMDB : HMDB00300
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{{#set: common name=uroporphyrinogen methyltransferase|uroporphyrinogen-III methyltransferase|adenosylmethionine-uroporphyrinogen III methyltransferase|S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase|SirA|CysG|uroporphyrin-III C-methyltransferase (incorrect)|S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_8614}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00106 C00106]
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{{#set: in pathway=PWY-7376|PWY-7377|PWY-5194|PWY-5196}}
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* CHEMSPIDER:
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{{#set: reconstruction category=orthology}}
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** [http://www.chemspider.com/Chemical-Structure.1141.html 1141]
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{{#set: reconstruction tool=pantograph}}
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* CHEBI:
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{{#set: reconstruction source=esiliculosus}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17568 17568]
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* BIGG : ura
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{{#set: smiles=C1(=CC(NC(=O)N1)=O)}}
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{{#set: inchi key=InChIKey=ISAKRJDGNUQOIC-UHFFFAOYSA-N}}
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{{#set: common name=uracil}}
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{{#set: molecular weight=112.088    }}
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{{#set: common name=U}}
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{{#set: consumed by=URACIL-PRIBOSYLTRANS-RXN}}
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{{#set: produced by=URIDINE-NUCLEOSIDASE-RXN|RXN0-2584}}
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{{#set: consumed or produced by=URANA1t|URPHOS-RXN|URA-PHOSPH-RXN|RXN0-5398}}
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Revision as of 16:23, 10 January 2018

Reaction RXN-8675

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):
    • uroporphyrinogen methyltransferase
    • uroporphyrinogen-III methyltransferase
    • adenosylmethionine-uroporphyrinogen III methyltransferase
    • S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase
    • SirA
    • CysG
    • uroporphyrin-III C-methyltransferase (incorrect)
    • S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7376, cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation): PWY-7376
    • 2 reactions found over 13 reactions in the full pathway
  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): PWY-7377
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-5194, siroheme biosynthesis: PWY-5194
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5196, factor 430 biosynthesis: PWY-5196
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




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