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Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9674 RXN-9674] == | + | == Gene Tiso_gene_1718 == |
| − | * direction: | + | * left end position: |
| − | ** LEFT-TO-RIGHT | + | ** 4302 |
| − | * common name: | + | * transcription direction: |
| − | ** beta-glucosidase-like_chloroplastic | + | ** POSITIVE |
| − | ** low_quality_protein:_beta-glucosidase-like_chloroplastic-like | + | * right end position: |
| − | ** ORF | + | ** 8544 |
| − | ** beta_glucosidase | + | * centisome position: |
| − | * ec number:
| + | ** 19.481049 |
| − | ** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21] | + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * [[3.4.21.83-RXN]] |
| − | ** 1 [[CPD-10277]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[CPD-12699]][c]
| + | ** in-silico_annotation |
| − | * With common name(s):
| + | ***automated-name-match |
| − | ** 1 lotaustralin[c] '''+''' 1 H2O[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 (2R)-2-hydroxy-2-methylbutanenitrile[c]
| + | == Pathways associated == |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_3467]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_6188]]
| + | |
| − | ** IN-SILICO_ANNOTATION | + | |
| − | ***EC-NUMBER | + | |
| − | * [[Tiso_gene_6187]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_6497]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_2843]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_13305]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_8669]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_6007]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_10001]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_2344]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_5836]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_15067]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_13306]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_15066]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-7092]], neolinustatin bioactivation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7092 PWY-7092]
| + | |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | * [[PWY-6002]], lotaustralin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6002 PWY-6002]
| + | |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | {{#set: left end position=4302}} |
| − | {{#set: common name=beta-glucosidase-like_chloroplastic}} | + | {{#set: transcription direction=POSITIVE}} |
| − | {{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}} | + | {{#set: right end position=8544}} |
| − | {{#set: common name=ORF}} | + | {{#set: centisome position=19.481049 }} |
| − | {{#set: common name=beta_glucosidase}} | + | {{#set: reaction associated=3.4.21.83-RXN}} |
| − | {{#set: ec number=EC-3.2.1.21}}
| + | |
| − | {{#set: gene associated=Tiso_gene_3467|Tiso_gene_6188|Tiso_gene_6187|Tiso_gene_6497|Tiso_gene_2843|Tiso_gene_13305|Tiso_gene_8669|Tiso_gene_6007|Tiso_gene_10001|Tiso_gene_2344|Tiso_gene_5836|Tiso_gene_15067|Tiso_gene_13306|Tiso_gene_15066}}
| + | |
| − | {{#set: in pathway=PWY-7092|PWY-6002}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=esiliculosus}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
