Difference between revisions of "Reduced-flavodoxins"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-302 RXN0-302] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-c-methyl-d-erythritol_-cycl...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7840 PWY-7840] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-302 RXN0-302] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7840 PWY-7840] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 
* common name:
 
* common name:
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** 2-c-methyl-d-erythritol_-cyclodiphosphate_synthase
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** gala-series glycosphingolipids biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/4.6.1.12 EC-4.6.1.12]
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* Synonym(s):
 
* Synonym(s):
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** ganglioside GM4 biosynthesis
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** galaglycosphingolipids biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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* '''3''' reaction(s) found
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** 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''=>''' 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c] '''+''' 1 [[CMP]][c]
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** [[RXN-18301]]
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* With common name(s):
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** [[RXN-18302]]
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** 1 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c] '''=>''' 1 2-C-methyl-D-erythritol-2,4-cyclodiphosphate[c] '''+''' 1 CMP[c]
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** [[RXN-18303]]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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* '''2''' reaction(s) not found
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18291 RXN-18291]
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* [[Tiso_gene_9642]]
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** [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.47-RXN 2.4.1.47-RXN]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23864 23864]
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{{#set: common name=gala-series glycosphingolipids biosynthesis}}
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* LIGAND-RXN:
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{{#set: common name=ganglioside GM4 biosynthesis|galaglycosphingolipids biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05637 R05637]
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{{#set: reaction found=3}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction not found=2}}
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{{#set: common name=2-c-methyl-d-erythritol_-cyclodiphosphate_synthase}}
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{{#set: ec number=EC-4.6.1.12}}
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{{#set: gene associated=Tiso_gene_9642}}
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{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:25, 10 January 2018

Pathway PWY-7840

  • taxonomic range:
  • common name:
    • gala-series glycosphingolipids biosynthesis
  • Synonym(s):
    • ganglioside GM4 biosynthesis
    • galaglycosphingolipids biosynthesis

Reaction(s) found

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Reduced-flavodoxins&oldid=12880"