Difference between revisions of "PWY-7180"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THI-P-SYN-RXN THI-P-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** thiamine_mon...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THI-P-SYN-RXN THI-P-SYN-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** adenosine ribonucleotides de novo biosynthesis
+
** ORF
 +
** thiamine_monophosphate_synthase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.5.1.3 EC-2.5.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''4''' reaction(s) found
+
* With identifiers:
−
** [[ADENYL-KIN-RXN]]
+
** 1 [[PROTON]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[THZ-P]][c] '''=>''' 1 [[THIAMINE-P]][c] '''+''' 1 [[PPI]][c]
−
** [[ATPSYN-RXN]]
+
* With common name(s):
−
** [[AMPSYN-RXN]]
+
** 1 H+[c] '''+''' 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''+''' 1 4-methyl-5-(2-phosphooxyethyl)thiazole[c] '''=>''' 1 thiamine phosphate[c] '''+''' 1 diphosphate[c]
−
** [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
+
 
−
== Reaction(s) not found ==
+
== Genes associated with this reaction  ==
−
* '''0''' reaction(s) not found
+
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_10320]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2159]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2160]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
* [[PWY-6897]], thiamine salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6897 PWY-6897]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6908]], thiamine diphosphate biosynthesis IV (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6908 PWY-6908]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[athaliana]]
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
* RHEA:
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7219 PWY-7219]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22328 22328]
−
{{#set: taxonomic range=TAX-2759}}
+
* LIGAND-RXN:
−
{{#set: taxonomic range=TAX-2157}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03223 R03223]
−
{{#set: taxonomic range=TAX-2}}
+
* UNIPROT:
−
{{#set: common name=adenosine ribonucleotides de novo biosynthesis}}
+
** [http://www.uniprot.org/uniprot/P41835 P41835]
−
{{#set: reaction found=4}}
+
** [http://www.uniprot.org/uniprot/P71350 P71350]
−
{{#set: reaction not found=0}}
+
** [http://www.uniprot.org/uniprot/O25514 O25514]
 +
** [http://www.uniprot.org/uniprot/Q9PNL3 Q9PNL3]
 +
** [http://www.uniprot.org/uniprot/Q9JWI2 Q9JWI2]
 +
** [http://www.uniprot.org/uniprot/Q9ZL01 Q9ZL01]
 +
** [http://www.uniprot.org/uniprot/P30137 P30137]
 +
** [http://www.uniprot.org/uniprot/P39594 P39594]
 +
** [http://www.uniprot.org/uniprot/P40386 P40386]
 +
** [http://www.uniprot.org/uniprot/P72965 P72965]
 +
** [http://www.uniprot.org/uniprot/O48881 O48881]
 +
** [http://www.uniprot.org/uniprot/O34294 O34294]
 +
** [http://www.uniprot.org/uniprot/Q9ZBL5 Q9ZBL5]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=thiamine_monophosphate_synthase}}
 +
{{#set: ec number=EC-2.5.1.3}}
 +
{{#set: gene associated=Tiso_gene_10320|Tiso_gene_2159|Tiso_gene_2160}}
 +
{{#set: in pathway=PWY-6897|PWY-7356|PWY-6908|PWY-7357}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=athaliana|esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:28, 10 January 2018

Reaction THI-P-SYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • thiamine_monophosphate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6897, thiamine salvage II: PWY-6897
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7356, thiamine salvage IV (yeast): PWY-7356
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6908, thiamine diphosphate biosynthesis IV (eukaryotes): PWY-6908
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7357, thiamine formation from pyrithiamine and oxythiamine (yeast): PWY-7357
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7180&oldid=13073"