Difference between revisions of "PWY-6527"

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(Created page with "Category:Gene == Gene Tiso_gene_4585 == * left end position: ** 1248 * transcription direction: ** NEGATIVE * right end position: ** 3049 * centisome position: ** 6.599334...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5286 RXN-5286] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4585 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5286 RXN-5286] ==
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* left end position:
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* direction:
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** 1248
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** NEGATIVE
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** [http://enzyme.expasy.org/EC/1.3.1.75 EC-1.3.1.75]
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* right end position:
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** 3049
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* centisome position:
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** 6.599334   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-15556]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c]
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***ec-number
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* With common name(s):
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 3,8-divinyl chlorophyllide a[c] '''=>''' 1 NADP+[c] '''+''' 1 chlorophyllide a[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7511]]
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* [[Tiso_gene_13868]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-5526]], bacteriochlorophyll a biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5526 PWY-5526]
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** '''1''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7758]], bacteriochlorophyll d biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7758 PWY-7758]
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** '''1''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-7759]], bacteriochlorophyll c biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7759 PWY-7759]
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** '''1''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5086]], chlorophyll a biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5086 PWY-5086]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7760]], bacteriochlorophyll e biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7760 PWY-7760]
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** '''1''' reactions found over '''26''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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* [[manual]]:
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** [[primary_network]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1248}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14449 14449]
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{{#set: right end position=3049}}
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* LIGAND-RXN:
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{{#set: centisome position=6.599334    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R06272 R06272]
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: ec number=EC-1.3.1.75}}
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{{#set: gene associated=Tiso_gene_13868}}
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{{#set: in pathway=PWY-5526|PWY-7758|PWY-7759|PWY-5064|PWY-5086|PWY-7760}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}

Revision as of 16:28, 10 January 2018

Reaction RXN-5286

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5526, bacteriochlorophyll a biosynthesis: PWY-5526
    • 1 reactions found over 13 reactions in the full pathway
  • PWY-7758, bacteriochlorophyll d biosynthesis: PWY-7758
    • 1 reactions found over 14 reactions in the full pathway
  • PWY-7759, bacteriochlorophyll c biosynthesis: PWY-7759
    • 1 reactions found over 18 reactions in the full pathway
  • PWY-5064, chlorophyll a biosynthesis II: PWY-5064
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5086, chlorophyll a biosynthesis I: PWY-5086
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7760, bacteriochlorophyll e biosynthesis: PWY-7760
    • 1 reactions found over 26 reactions in the full pathway

Reconstruction information

External links





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