Difference between revisions of "DEOXY-D-RIBOSE-1-PHOSPHATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparaginase * ec...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** asparaginase
 
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
 
−
** [http://enzyme.expasy.org/EC/3.5.1.1 EC-3.5.1.1]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ASN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[3-7-DIMETHYLXANTHINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-12482]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-asparagine[c] '''+''' 1 H2O[c] '''=>''' 1 L-aspartate[c] '''+''' 1 ammonium[c]
+
** 1 theobromine[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 3,7-dimethylurate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3570]]
+
* [[Tiso_gene_11775]]
−
** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_19398]]
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−
** IN-SILICO_ANNOTATION
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−
***AUTOMATED-NAME-MATCH
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−
** [[pantograph]]-[[synechocystis]]
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−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17477]]
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−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[ASPASN-PWY]], superpathway of L-aspartate and L-asparagine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPASN-PWY ASPASN-PWY]
+
* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[ASPARAGINE-DEG1-PWY]], L-asparagine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY ASPARAGINE-DEG1-PWY]
+
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
−
* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[creinhardtii]]
+
*** [[athaliana]]
−
*** [[synechocystis]]
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21016 21016]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00485 R00485]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07978 R07978]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P06608 P06608]
+
−
** [http://www.uniprot.org/uniprot/P26900 P26900]
+
−
** [http://www.uniprot.org/uniprot/P43843 P43843]
+
−
** [http://www.uniprot.org/uniprot/Q9V262 Q9V262]
+
−
** [http://www.uniprot.org/uniprot/Q9JT73 Q9JT73]
+
−
** [http://www.uniprot.org/uniprot/O25424 O25424]
+
−
** [http://www.uniprot.org/uniprot/P37595 P37595]
+
−
** [http://www.uniprot.org/uniprot/Q9ZLB9 Q9ZLB9]
+
−
** [http://www.uniprot.org/uniprot/O34482 O34482]
+
−
** [http://www.uniprot.org/uniprot/Q9V2K1 Q9V2K1]
+
−
** [http://www.uniprot.org/uniprot/O57797 O57797]
+
−
** [http://www.uniprot.org/uniprot/Q9PJ82 Q9PJ82]
+
−
** [http://www.uniprot.org/uniprot/P30363 P30363]
+
−
** [http://www.uniprot.org/uniprot/P30362 P30362]
+
−
** [http://www.uniprot.org/uniprot/P30364 P30364]
+
−
** [http://www.uniprot.org/uniprot/P38986 P38986]
+
−
** [http://www.uniprot.org/uniprot/P50287 P50287]
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−
** [http://www.uniprot.org/uniprot/P11163 P11163]
+
−
** [http://www.uniprot.org/uniprot/P50286 P50286]
+
−
** [http://www.uniprot.org/uniprot/P87015 P87015]
+
−
** [http://www.uniprot.org/uniprot/Q9UTS7 Q9UTS7]
+
−
** [http://www.uniprot.org/uniprot/P00805 P00805]
+
−
** [http://www.uniprot.org/uniprot/P0A962 P0A962]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=asparaginase}}
+
{{#set: gene associated=Tiso_gene_11775}}
−
{{#set: ec number=EC-3.5.1.38}}
+
{{#set: in pathway=PWY-6632}}
−
{{#set: ec number=EC-3.5.1.1}}
+
−
{{#set: gene associated=Tiso_gene_3570|Tiso_gene_19398|Tiso_gene_17477}}
+
−
{{#set: in pathway=ASPASN-PWY|ASPARAGINE-DEG1-PWY|ASPARAGINE-DEG1-PWY-1}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
+
{{#set: reconstruction source=athaliana}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 17:30, 10 January 2018

Reaction RXN-11519

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6632, caffeine degradation IV (bacteria, via demethylation and oxidation): PWY-6632
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




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