Difference between revisions of "RXN-15013"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2588 == * left end position: ** 520 * transcription direction: ** POSITIVE * right end position: ** 4731 * centisome position: ** 2.766546...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] ==
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== Gene Tiso_gene_2588 ==
* direction:
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* left end position:
** LEFT-TO-RIGHT
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** 520
 +
* transcription direction:
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** POSITIVE
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* right end position:
 +
** 4731
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* centisome position:
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** 2.766546   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[3.2.1.84-RXN]]
** 1 [[1-7-DIMETHYLXANTHINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-12483]][c]
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** in-silico_annotation
* With common name(s):
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***ec-number
** 1 paraxanthine[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 1,7-dimethylurate[c]
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** experimental_annotation
 
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***ec-number
== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
Genes have been associated with this reaction based on different elements listed below.
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* [[ALPHAGALACTOSID-RXN]]
* [[Tiso_gene_11775]]
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** [[pantograph]]-[[athaliana]]
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* [[RXN-15910]]
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** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[athaliana]]
== Pathways  ==
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* [[RXN-2141]]
* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
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** [[pantograph]]-[[esiliculosus]]
** '''4''' reactions found over '''5''' reactions in the full pathway
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== Pathways associated ==
== Reconstruction information  ==
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* [[PWY-842]]
* [[orthology]]:
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* [[PWY0-1301]]
** [[pantograph]]:
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*** [[athaliana]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: left end position=520}}
** [http://www.genome.jp/dbget-bin/www_bget?R07977 R07977]
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{{#set: transcription direction=POSITIVE}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4731}}
{{#set: gene associated=Tiso_gene_11775}}
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{{#set: centisome position=2.766546    }}
{{#set: in pathway=PWY-6632}}
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{{#set: reaction associated=3.2.1.84-RXN|ALPHAGALACTOSID-RXN|RXN-15910|RXN-2141}}
{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-842|PWY0-1301}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana}}
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Revision as of 17:33, 10 January 2018

Gene Tiso_gene_2588

  • left end position:
    • 520
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4731
  • centisome position:
    • 2.766546
  • Synonym(s):

Reactions associated

Pathways associated

External links