Difference between revisions of "ATGD"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12994 RXN-12994] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7778 PWY-7778] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12994 RXN-12994] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7778 PWY-7778] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** chloroplast_beta-keto_acyl_reductase
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** 2-methylpropene degradation
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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* '''2''' reaction(s) found
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** 1 [[CPD-14422]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-14419]][c]
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** [[RXN-11662]]
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* With common name(s):
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** [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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** 1 3-oxo-icosatrienoyl-CoA[c] '''+''' 1 NAD(P)H[c] '''+''' 1 H+[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 3R-hydroxy-icosatrienoyl-CoA[c]
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== Reaction(s) not found ==
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* '''6''' reaction(s) not found
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== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17605 RXN-17605]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17606 RXN-17606]
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* [[Tiso_gene_9871]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17602 RXN-17602]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17603 RXN-17603]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17589 RXN-17589]
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** EXPERIMENTAL_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17588 RXN-17588]
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***EC-NUMBER
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* [[Tiso_gene_13083]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9885]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7619]], juniperonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: common name=2-methylpropene degradation}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: reaction found=2}}
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{{#set: gene associated=Tiso_gene_9871|Tiso_gene_13083|Tiso_gene_9885}}
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{{#set: reaction not found=6}}
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{{#set: in pathway=PWY-7602|PWY-7619|PWY-7724}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:34, 10 January 2018

Pathway PWY-7778

  • taxonomic range:
  • common name:
    • 2-methylpropene degradation
  • Synonym(s):

Reaction(s) found

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ATGD&oldid=13617"