Difference between revisions of "ATGD"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12994 RXN-12994] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7778 PWY-7778] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12994 RXN-12994] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7778 PWY-7778] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** chloroplast_beta-keto_acyl_reductase
+
** 2-methylpropene degradation
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
* '''2''' reaction(s) found
−
** 1 [[CPD-14422]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-14419]][c]
+
** [[RXN-11662]]
−
* With common name(s):
+
** [[ACETYL-COA-ACETYLTRANSFER-RXN]]
−
** 1 3-oxo-icosatrienoyl-CoA[c] '''+''' 1 NAD(P)H[c] '''+''' 1 H+[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 3R-hydroxy-icosatrienoyl-CoA[c]
+
== Reaction(s) not found ==
−
 
+
* '''6''' reaction(s) not found
−
== Genes associated with this reaction  ==
+
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17605 RXN-17605]
−
Genes have been associated with this reaction based on different elements listed below.
+
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17606 RXN-17606]
−
* [[Tiso_gene_9871]]
+
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17602 RXN-17602]
−
** IN-SILICO_ANNOTATION
+
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17603 RXN-17603]
−
***EC-NUMBER
+
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17589 RXN-17589]
−
** EXPERIMENTAL_ANNOTATION
+
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-17588 RXN-17588]
−
***EC-NUMBER
+
−
* [[Tiso_gene_13083]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_9885]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7619]], juniperonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
+
{{#set: common name=2-methylpropene degradation}}
−
{{#set: ec number=EC-1.1.1.330}}
+
{{#set: reaction found=2}}
−
{{#set: gene associated=Tiso_gene_9871|Tiso_gene_13083|Tiso_gene_9885}}
+
{{#set: reaction not found=6}}
−
{{#set: in pathway=PWY-7602|PWY-7619|PWY-7724}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 16:34, 10 January 2018

Pathway PWY-7778

  • taxonomic range:
  • common name:
    • 2-methylpropene degradation
  • Synonym(s):

Reaction(s) found

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ATGD&oldid=13617"