Difference between revisions of "PWY0-1466"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12747 RXN-12747] == * direction: ** LEFT-TO-RIGHT * common name: ** 5-hydroxy-3-[(3aS,4S,5R,7aS...")
 
(Created page with "Category:Gene == Gene Tiso_gene_11297 == * left end position: ** 4785 * transcription direction: ** NEGATIVE * right end position: ** 7171 * centisome position: ** 60.6079...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12747 RXN-12747] ==
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== Gene Tiso_gene_11297 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4785
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* common name:
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* transcription direction:
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** 5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA 5-dehydrogenase
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** NEGATIVE
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** 3-beta_hydroxysteroid_dehydrogenase_isomerase
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* right end position:
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** ORF
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** 7171
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.145 EC-1.1.1.145]
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** 60.607983   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[HISTCYCLOHYD-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[CPD-13754]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-13755]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 NADPH[c] '''+''' 1 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA[c]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_18774]]
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* [[HISTPRATPHYD-RXN]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[athaliana]]
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***EC-NUMBER
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_2957]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11016]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_897]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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** [[pantograph]]-[[creinhardtii]]
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* [[PWY-6944]], androstenedione degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6944 PWY-6944]
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* [[PRACH]]
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** '''2''' reactions found over '''15''' reactions in the full pathway
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** [[pantograph]]-[[creinhardtii]]
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== Reconstruction information  ==
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* [[PRADP]]
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* [[orthology]]:
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]:
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== Pathways associated ==
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*** [[esiliculosus]]
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* [[HISTSYN-PWY]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=4785}}
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{{#set: common name=5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA 5-dehydrogenase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=3-beta_hydroxysteroid_dehydrogenase_isomerase}}
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{{#set: right end position=7171}}
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{{#set: common name=ORF}}
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{{#set: centisome position=60.607983    }}
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{{#set: ec number=EC-1.1.1.145}}
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{{#set: reaction associated=HISTCYCLOHYD-RXN|HISTPRATPHYD-RXN|PRACH|PRADP}}
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{{#set: gene associated=Tiso_gene_18774|Tiso_gene_2957|Tiso_gene_11016|Tiso_gene_897}}
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{{#set: pathway associated=HISTSYN-PWY}}
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{{#set: in pathway=PWY-6944}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 17:36, 10 January 2018

Gene Tiso_gene_11297

  • left end position:
    • 4785
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 7171
  • centisome position:
    • 60.607983
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY0-1466&oldid=13745"