Difference between revisions of "CPD-13171"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4021 RXN-4021] == * direction: ** LEFT-TO-RIGHT * common name: ** sterol_methyltransferase * ec...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4021 RXN-4021] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** sterol_methyltransferase
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** isoprene biosynthesis II (engineered)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.41 EC-2.1.1.41]
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* Synonym(s):
 
* Synonym(s):
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** isoprenoid pathway
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** MVA pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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* '''6''' reaction(s) found
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** 1 [[CYCLOARTENOL]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-696]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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** [[1.1.1.34-RXN]]
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* With common name(s):
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** [[HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN]]
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** 1 cycloartenol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 24-methylenecycloartanol[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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** [[IPPISOM-RXN]]
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** [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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== Genes associated with this reaction  ==
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** [[MEVALONATE-KINASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
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* [[Tiso_gene_11849]]
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== Reaction(s) not found ==
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** IN-SILICO_ANNOTATION
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* '''2''' reaction(s) not found
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***AUTOMATED-NAME-MATCH
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** [http://metacyc.org/META/NEW-IMAGE?object=4.2.3.27-RXN 4.2.3.27-RXN]
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* [[Tiso_gene_11850]]
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** [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOMEVALONATE-KINASE-RXN PHOSPHOMEVALONATE-KINASE-RXN]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_12590]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-7155]], 7-dehydroporiferasterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7155 PWY-7155]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
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** '''10''' reactions found over '''36''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07481 R07481]
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{{#set: taxonomic range=TAX-33208}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: common name=sterol_methyltransferase}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-2.1.1.41}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: gene associated=Tiso_gene_11849|Tiso_gene_11850|Tiso_gene_12590}}
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{{#set: common name=isoprene biosynthesis II (engineered)}}
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{{#set: in pathway=PWY-7155|PWY-2541}}
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{{#set: common name=isoprenoid pathway|MVA pathway}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction found=6}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reaction not found=2}}
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{{#set: reconstruction source=creinhardtii|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:39, 10 January 2018

Pathway PWY-7391

Reaction(s) found

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-13171&oldid=13976"