Difference between revisions of "Tiso gene 406"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CARBAMATE CARBAMATE] == * smiles: ** C(=O)([O-])N * inchi key: ** InChIKey=KXDHJXZQYSOELW-UHFFF...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CARBAMATE CARBAMATE] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(=O)([O-])N
 +
* inchi key:
 +
** InChIKey=KXDHJXZQYSOELW-UHFFFAOYSA-M
 
* common name:
 
* common name:
−
** 2,3-Dihydroxy-3-methylvalerate dehydratase
+
** carbamate
−
* ec number:
+
* molecular weight:
−
** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9]
+
** 60.032   
 
* Synonym(s):
 
* Synonym(s):
 +
** carbamic acid
 +
** aminoformic acid
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN-14196]]
−
** 1 [[1-KETO-2-METHYLVALERATE]][c] '''=>''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[WATER]][c]
+
* [[RXN0-5222]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 (R)-2,3-dihydroxy-3-methylpentanoate[c] '''=>''' 1 (S)-3-methyl-2-oxopentanoate[c] '''+''' 1 H2O[c]
+
* [[R524-RXN]]
−
 
+
* [[RXN-16910]]
−
== Genes associated with this reaction  ==
+
== Reaction(s) of unknown directionality ==
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_1563]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
== Pathways  ==
+
−
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
+
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
+
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[creinhardtii]]
+
−
*** [[synechocystis]]
+
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* PUBCHEM:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27694 27694]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=276 276]
−
* LIGAND-RXN:
+
* CHEMSPIDER:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05070 R05070]
+
** [http://www.chemspider.com/Chemical-Structure.270.html 270]
−
* UNIPROT:
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/P55186 P55186]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=13941 13941]
−
** [http://www.uniprot.org/uniprot/Q9JUE0 Q9JUE0]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/P05791 P05791]
+
** [http://www.genome.jp/dbget-bin/www_bget?C01563 C01563]
−
** [http://www.uniprot.org/uniprot/Q9UZ03 Q9UZ03]
+
* HMDB : HMDB03551
−
** [http://www.uniprot.org/uniprot/P44851 P44851]
+
{{#set: smiles=C(=O)([O-])N}}
−
** [http://www.uniprot.org/uniprot/Q02139 Q02139]
+
{{#set: inchi key=InChIKey=KXDHJXZQYSOELW-UHFFFAOYSA-M}}
−
** [http://www.uniprot.org/uniprot/Q9PJ98 Q9PJ98]
+
{{#set: common name=carbamate}}
−
** [http://www.uniprot.org/uniprot/P39522 P39522]
+
{{#set: molecular weight=60.032    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=carbamic acid|aminoformic acid}}
−
{{#set: common name=2,3-Dihydroxy-3-methylvalerate dehydratase}}
+
{{#set: consumed by=RXN-14196|RXN0-5222}}
−
{{#set: ec number=EC-4.2.1.9}}
+
{{#set: produced by=R524-RXN|RXN-16910}}
−
{{#set: gene associated=Tiso_gene_1563}}
+
−
{{#set: in pathway=PWY-5103|ILEUSYN-PWY|PWY-5101|PWY-5104}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation}}
+

Revision as of 16:40, 10 January 2018

Metabolite CARBAMATE

  • smiles:
    • C(=O)([O-])N
  • inchi key:
    • InChIKey=KXDHJXZQYSOELW-UHFFFAOYSA-M
  • common name:
    • carbamate
  • molecular weight:
    • 60.032
  • Synonym(s):
    • carbamic acid
    • aminoformic acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(=O)([O-])N" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_406&oldid=14031"