Difference between revisions of "Tiso gene 13520"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7821 PWY-7821] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutaminase ** aspara...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7821 PWY-7821] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** tunicamycin biosynthesis
+
** glutaminase
 +
** asparagine_synthetase
 +
** glutamine_amidotransferase
 +
** ferredoxin-dependent_glutamate_synthase
 +
** ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits
 +
** carbamoyl_phosphate_synthetase
 +
** asparagine_synthetase_domaincontaining_protein_putat
 +
** glutamate_synthase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
 +
** [http://enzyme.expasy.org/EC/3.5.1.2 EC-3.5.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
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== Reaction Formula ==
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* '''2''' reaction(s) found
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* With identifiers:
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** [[RXN-14139]]
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** 1 [[WATER]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[AMMONIUM]][c]
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** [[RXN-14025]]
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* With common name(s):
−
== Reaction(s) not found ==
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** 1 H2O[c] '''+''' 1 L-glutamine[c] '''=>''' 1 L-glutamate[c] '''+''' 1 ammonium[c]
−
* '''7''' reaction(s) not found
+
 
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18072 RXN-18072]
+
== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18073 RXN-18073]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18070 RXN-18070]
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* [[Tiso_gene_17058]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18071 RXN-18071]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18074 RXN-18074]
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***AUTOMATED-NAME-MATCH
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18069 RXN-18069]
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* [[Tiso_gene_3435]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18068 RXN-18068]
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** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_17333]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3434]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_19661]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_4976]]
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** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_1773]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_4685]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_4975]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_6657]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_1154]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_7495]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_2973]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_2581]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_11511]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways  ==
 +
* [[GLUTAMINDEG-PWY]], L-glutamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* RHEA:
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{{#set: common name=tunicamycin biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15889 15889]
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{{#set: reaction found=2}}
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* LIGAND-RXN:
−
{{#set: reaction not found=7}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00256 R00256]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P10172 P10172]
 +
** [http://www.uniprot.org/uniprot/P28492 P28492]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=glutaminase}}
 +
{{#set: common name=asparagine_synthetase}}
 +
{{#set: common name=glutamine_amidotransferase}}
 +
{{#set: common name=ferredoxin-dependent_glutamate_synthase}}
 +
{{#set: common name=ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits}}
 +
{{#set: common name=carbamoyl_phosphate_synthetase}}
 +
{{#set: common name=asparagine_synthetase_domaincontaining_protein_putat}}
 +
{{#set: common name=glutamate_synthase}}
 +
{{#set: ec number=EC-3.5.1.38}}
 +
{{#set: ec number=EC-3.5.1.2}}
 +
{{#set: gene associated=Tiso_gene_17058|Tiso_gene_3435|Tiso_gene_17333|Tiso_gene_3434|Tiso_gene_19661|Tiso_gene_4976|Tiso_gene_1773|Tiso_gene_4685|Tiso_gene_4975|Tiso_gene_6657|Tiso_gene_1154|Tiso_gene_7495|Tiso_gene_2973|Tiso_gene_2581|Tiso_gene_11511}}
 +
{{#set: in pathway=GLUTAMINDEG-PWY|CITRULBIO-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:40, 10 January 2018

Reaction GLUTAMIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutaminase
    • asparagine_synthetase
    • glutamine_amidotransferase
    • ferredoxin-dependent_glutamate_synthase
    • ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits
    • carbamoyl_phosphate_synthetase
    • asparagine_synthetase_domaincontaining_protein_putat
    • glutamate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-glutamine[c] => 1 L-glutamate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links










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