Difference between revisions of "PWY-5084"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1084 RXN1G-1084] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carri...")
 
(Created page with "Category:Gene == Gene Tiso_gene_406 == * left end position: ** 623 * transcription direction: ** POSITIVE * right end position: ** 4905 * centisome position: ** 1.8510265...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1084 RXN1G-1084] ==
+
== Gene Tiso_gene_406 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 623
−
* common name:
+
* transcription direction:
−
** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
+
** 4905
 +
* centisome position:
 +
** 1.8510265   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[METHIONINE--TRNA-LIGASE-RXN]]
−
** 1 [[cis-delta19-3-hydroxyC38-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[trans-D2-cis-D19-C38-ACPs]][c]
+
** experimental_annotation
−
* With common name(s):
+
***ec-number
−
** 1 a cis-delta19-3-hydroxyC38:1-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans-delta2-cis-delta19-C38:2-[acp][c]
+
** [[pantograph]]-[[esiliculosus]]
−
 
+
* [[RXN-16165]]
−
== Genes associated with this reaction  ==
+
** experimental_annotation
−
Genes have been associated with this reaction based on different elements listed below.
+
***ec-number
−
* [[Tiso_gene_6884]]
+
== Pathways associated ==
−
** EXPERIMENTAL_ANNOTATION
+
* [[TRNA-CHARGING-PWY]]
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways ==
+
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
−
** '''86''' reactions found over '''182''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=623}}
−
{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: ec number=EC-4.2.1.59}}
+
{{#set: right end position=4905}}
−
{{#set: gene associated=Tiso_gene_6884}}
+
{{#set: centisome position=1.8510265    }}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: reaction associated=METHIONINE--TRNA-LIGASE-RXN|RXN-16165}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: pathway associated=TRNA-CHARGING-PWY}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation}}
+

Revision as of 16:40, 10 January 2018

Gene Tiso_gene_406

  • left end position:
    • 623
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4905
  • centisome position:
    • 1.8510265
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5084&oldid=14066"