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Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9655 RXN-9655] == | + | == Gene Tiso_gene_18172 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** polyketide_synthase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
| + | |
| − | ** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| − | ** (3R)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase
| |
| − | ** β-hydroxyacyl-ACP dehydrase
| |
| − | ** HDDase
| |
| − | ** β-hydroxyacyl-acyl carrier protein dehydratase
| |
| − | ** FabA
| |
| − | ** β-hydroxydecanoyl thiol ester dehydrase
| |
| − | ** β-hydroxydecanoate dehydrase
| |
| − | ** D-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase
| |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * [[NADH-DEHYDROG-A-RXN]] |
| − | ** 1 [[Beta-hydroxydecanoyl-ACPs]][c] '''=>''' 1 [[Trans-D2-decenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
| + | ** [[pantograph]]-[[esiliculosus]] |
| − | * With common name(s): | + | * [[RXN0-5330]] |
| − | ** 1 a (3R)-3-hydroxydecanoyl-[acp][c] '''=>''' 1 a (2E)-dec-2-enoyl-[acp][c] '''+''' 1 H2O[c] | + | ** [[pantograph]]-[[esiliculosus]] |
| − | | + | == Pathways associated == |
| − | == Genes associated with this reaction ==
| + | * [[PWY-6692]] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | * [[PWY-3781]] |
| − | * [[Tiso_gene_135]]
| + | * [[PWY-7269]] |
| − | ** IN-SILICO_ANNOTATION
| + | * [[PWY-7279]] |
| − | ***EC-NUMBER
| + | * [[PWY0-1573]] |
| − | * [[Tiso_gene_500]]
| + | * [[PWY0-1567]] |
| − | ** IN-SILICO_ANNOTATION
| + | * [[PWY0-1334]] |
| − | ***EC-NUMBER
| + | * [[PWY0-1335]] |
| − | * [[Tiso_gene_10876]] | + | * [[PWY-5083]] |
| − | ** IN-SILICO_ANNOTATION
| + | * [[PWY0-1568]] |
| − | ***EC-NUMBER
| + | * [[PWY-4302]] |
| − | * [[Tiso_gene_13394]]
| + | |
| − | ** IN-SILICO_ANNOTATION | + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_136]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_6884]]
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971] | + | |
| − | ** '''31''' reactions found over '''31''' reactions in the full pathway
| + | |
| − | * [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] | + | |
| − | ** '''31''' reactions found over '''31''' reactions in the full pathway
| + | |
| − | * [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862] | + | |
| − | ** '''5''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[manual]]: | + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]: | + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | {{#set: reaction associated=NADH-DEHYDROG-A-RXN|RXN0-5330}} |
| − | {{#set: common name=polyketide_synthase}}
| + | {{#set: pathway associated=PWY-6692|PWY-3781|PWY-7269|PWY-7279|PWY0-1573|PWY0-1567|PWY0-1334|PWY0-1335|PWY-5083|PWY0-1568|PWY-4302}} |
| − | {{#set: ec number=EC-2.3.1.86}}
| + | |
| − | {{#set: ec number=EC-2.3.1.85}}
| + | |
| − | {{#set: ec number=EC-4.2.1.59}} | + | |
| − | {{#set: common name=(3R)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase|β-hydroxyacyl-ACP dehydrase|HDDase|β-hydroxyacyl-acyl carrier protein dehydratase|FabA|β-hydroxydecanoyl thiol ester dehydrase|β-hydroxydecanoate dehydrase|D-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase}}
| + | |
| − | {{#set: gene associated=Tiso_gene_135|Tiso_gene_500|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_6884}}
| + | |
| − | {{#set: in pathway=PWY-5971|PWY-5994|PWY0-862}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
