Difference between revisions of "Tiso gene 2577"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13182 RXN-13182] == * direction: ** LEFT-TO-RIGHT * common name: ** sialate_o-acetylesterase-li...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * direction: ** REVERSIBLE * common name: ** aminotransferase ** aspartate_...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13182 RXN-13182] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** sialate_o-acetylesterase-like_protein
+
** aminotransferase
−
** ORF
+
** aspartate_aminotransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.53 EC-3.1.1.53]
+
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[N-ACETYL-9-O-ACETYLNEURAMINATE]][c] '''=>''' 1 [[N-ACETYLNEURAMINATE]][c] '''+''' 1 [[ACET]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[L-CYSTEATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[CPD-380]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 N-acetyl-9-O-acetylneuraminate[c] '''=>''' 1 N-acetylneuraminate[c] '''+''' 1 acetate[c] '''+''' 1 H+[c]
+
** 1 L-cysteate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 3-sulfopyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17029]]
+
* [[Tiso_gene_17809]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_17718]]
 +
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_4418]]
+
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_12889]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_4419]]
+
* [[Tiso_gene_6815]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_13538]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_15680]]
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[athaliana]]
 +
*** [[esiliculosus]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-RXN:
−
{{#set: common name=sialate_o-acetylesterase-like_protein}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
−
{{#set: common name=ORF}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-3.1.1.53}}
+
{{#set: common name=aminotransferase}}
−
{{#set: gene associated=Tiso_gene_17029|Tiso_gene_4418|Tiso_gene_4419}}
+
{{#set: common name=aspartate_aminotransferase}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-2.6.1.1}}
 +
{{#set: gene associated=Tiso_gene_17809|Tiso_gene_17718|Tiso_gene_12889|Tiso_gene_6815|Tiso_gene_13538|Tiso_gene_15680}}
 +
{{#set: in pathway=PWY-6638|PWY-6643|PWY-6642}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:44, 10 January 2018

Reaction RXN-11737

  • direction:
    • REVERSIBLE
  • common name:
    • aminotransferase
    • aspartate_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-cysteate[c] + 1 2-oxoglutarate[c] <=> 1 L-glutamate[c] + 1 3-sulfopyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6638, sulfolactate degradation III: PWY-6638
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6643, coenzyme M biosynthesis II: PWY-6643
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6642, (R)-cysteate degradation: PWY-6642
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2577&oldid=14412"