Difference between revisions of "GCVP-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTII-RXN RIBONUCLEOSIDE-DIP-REDUCTII-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
(Created page with "Category:Gene == Gene Tiso_gene_4288 == * left end position: ** 77 * transcription direction: ** POSITIVE * right end position: ** 3158 * centisome position: ** 0.5107455...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTII-RXN RIBONUCLEOSIDE-DIP-REDUCTII-RXN] ==
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== Gene Tiso_gene_4288 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 77
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* common name:
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* transcription direction:
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** ribonucleoside-diphosphate_reductase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
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** 3158
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* centisome position:
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** 0.5107455   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[HYDROG-RXN]]
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** 1 [[Reduced-NrdH-Proteins]][c] '''+''' 1 [[CDP]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Oxidized-NrdH-Proteins]][c] '''+''' 1 [[DCDP]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 a reduced NrdH glutaredoxin-like protein[c] '''+''' 1 CDP[c] '''=>''' 1 H2O[c] '''+''' 1 an oxidized NrdH glutaredoxin-like protein[c] '''+''' 1 dCDP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10138]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9915]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9916]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10617]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Pathways associated ==
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
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* [[PWY-6780]]
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** '''12''' reactions found over '''17''' reactions in the full pathway
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* [[GLUDEG-II-PWY]]
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== Reconstruction information  ==
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* [[PWY-6785]]
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* [[orthology]]:
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* [[PWY-6759]]
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** [[pantograph]]:
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* [[PWY4LZ-257]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=77}}
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{{#set: common name=ribonucleoside-diphosphate_reductase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.17.4.1}}
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{{#set: right end position=3158}}
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{{#set: gene associated=Tiso_gene_10138|Tiso_gene_9915|Tiso_gene_9916|Tiso_gene_10617}}
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{{#set: centisome position=0.5107455    }}
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{{#set: in pathway=PWY0-166}}
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{{#set: reaction associated=HYDROG-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-6780|GLUDEG-II-PWY|PWY-6785|PWY-6759|PWY4LZ-257}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:44, 10 January 2018

Gene Tiso_gene_4288

  • left end position:
    • 77
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3158
  • centisome position:
    • 0.5107455
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GCVP-RXN&oldid=14434"