Difference between revisions of "RXN-13297"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-602 CPD-602] == * smiles: ** C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)NC2(=C(N)C(=O)NC(=O)N2)) *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-602 CPD-602] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] ==
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* smiles:
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* direction:
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** C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)NC2(=C(N)C(=O)NC(=O)N2))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=LZEXYCAGPMYXLX-UMMCILCDSA-L
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* common name:
 
* common name:
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** 5-amino-6-(5-phospho-D-ribosylamino)uracil
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** ORF
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* molecular weight:
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** prolyl-trna_synthetase
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** 352.197   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.15 EC-6.1.1.15]
 
* Synonym(s):
 
* Synonym(s):
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** 5-amino-6-(ribosylamino)-2,4-(1H,3H)-pyrimidinedione 5'-phosphate
 
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** 5-amino-6-(5'-phosphoribosylamino)uracil
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RIBOFLAVINSYNREDUC-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[PRO-tRNAs]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[Charged-PRO-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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* [[RIBOFLAVINSYNDEAM-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ATP[c] '''+''' 1 a tRNApro[c] '''+''' 1 L-proline[c] '''=>''' 1 an L-prolyl-[tRNApro][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11974]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14791]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245199 25245199]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14305 14305]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58453 58453]
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** [http://www.genome.jp/dbget-bin/www_bget?R03661 R03661]
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* BIGG : 5apru
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/O51363 O51363]
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** [http://www.genome.jp/dbget-bin/www_bget?C01268 C01268]
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** [http://www.uniprot.org/uniprot/O58734 O58734]
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{{#set: smiles=C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)NC2(=C(N)C(=O)NC(=O)N2))}}
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** [http://www.uniprot.org/uniprot/Q9ZMJ6 Q9ZMJ6]
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{{#set: inchi key=InChIKey=LZEXYCAGPMYXLX-UMMCILCDSA-L}}
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** [http://www.uniprot.org/uniprot/P43830 P43830]
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{{#set: common name=5-amino-6-(5-phospho-D-ribosylamino)uracil}}
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** [http://www.uniprot.org/uniprot/P47525 P47525]
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{{#set: molecular weight=352.197    }}
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** [http://www.uniprot.org/uniprot/O26708 O26708]
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{{#set: common name=5-amino-6-(ribosylamino)-2,4-(1H,3H)-pyrimidinedione 5'-phosphate|5-amino-6-(5'-phosphoribosylamino)uracil}}
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** [http://www.uniprot.org/uniprot/Q9JU09 Q9JU09]
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{{#set: consumed by=RIBOFLAVINSYNREDUC-RXN}}
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** [http://www.uniprot.org/uniprot/Q58635 Q58635]
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{{#set: produced by=RIBOFLAVINSYNDEAM-RXN}}
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** [http://www.uniprot.org/uniprot/P56124 P56124]
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** [http://www.uniprot.org/uniprot/O83195 O83195]
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** [http://www.uniprot.org/uniprot/Q9Z851 Q9Z851]
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** [http://www.uniprot.org/uniprot/O31755 O31755]
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** [http://www.uniprot.org/uniprot/P36431 P36431]
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** [http://www.uniprot.org/uniprot/Q9ZDE7 Q9ZDE7]
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** [http://www.uniprot.org/uniprot/Q9PHX1 Q9PHX1]
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** [http://www.uniprot.org/uniprot/Q9CDT4 Q9CDT4]
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** [http://www.uniprot.org/uniprot/Q9WYY4 Q9WYY4]
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** [http://www.uniprot.org/uniprot/P75382 P75382]
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** [http://www.uniprot.org/uniprot/Q49090 Q49090]
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** [http://www.uniprot.org/uniprot/P07814 P07814]
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** [http://www.uniprot.org/uniprot/P16659 P16659]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=prolyl-trna_synthetase}}
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{{#set: ec number=EC-6.1.1.15}}
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{{#set: gene associated=Tiso_gene_11974|Tiso_gene_14791}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:49, 10 January 2018

Reaction PROLINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • prolyl-trna_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 a tRNApro[c] + 1 L-proline[c] => 1 an L-prolyl-[tRNApro][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13297&oldid=14777"