Difference between revisions of "CPD-420"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** selenophosphate_synthet...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14281 CPD-14281] == * smiles: ** CCCCCCCCCCCCCCCCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14281 CPD-14281] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCCCCCCCCCCCCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O
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* inchi key:
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** InChIKey=KRTIFNFQCJTGMV-DYAVHEMFSA-J
 
* common name:
 
* common name:
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** selenophosphate_synthetase
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** trans-docos-2-enoyl-CoA
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.7.9.3 EC-2.7.9.3]
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** 1084.06   
 
* Synonym(s):
 
* Synonym(s):
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** trans-2,3-dihydro-docosenoyl-CoA
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** (2E)-docosenoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-13307]]
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** 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[SE-2]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[SEPO3]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-13303]]
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** 1 H2O[c] '''+''' 1 ATP[c] '''+''' 1 selenide[c] '''=>''' 1 AMP[c] '''+''' 1 phosphate[c] '''+''' 1 selenophosphate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5668]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5669]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14608]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71627306 71627306]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R03595 R03595]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=74692 74692]
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* UNIPROT:
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{{#set: smiles=CCCCCCCCCCCCCCCCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O}}
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** [http://www.uniprot.org/uniprot/Q9PMF9 Q9PMF9]
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{{#set: inchi key=InChIKey=KRTIFNFQCJTGMV-DYAVHEMFSA-J}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=trans-docos-2-enoyl-CoA}}
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{{#set: common name=selenophosphate_synthetase}}
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{{#set: molecular weight=1084.06    }}
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{{#set: ec number=EC-2.7.9.3}}
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{{#set: common name=trans-2,3-dihydro-docosenoyl-CoA|(2E)-docosenoyl-CoA}}
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{{#set: gene associated=Tiso_gene_5668|Tiso_gene_5669|Tiso_gene_14608}}
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{{#set: consumed by=RXN-13307}}
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{{#set: in pathway=PWY0-901|PWY-6281}}
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{{#set: produced by=RXN-13303}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:49, 10 January 2018

Metabolite CPD-14281

  • smiles:
    • CCCCCCCCCCCCCCCCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O
  • inchi key:
    • InChIKey=KRTIFNFQCJTGMV-DYAVHEMFSA-J
  • common name:
    • trans-docos-2-enoyl-CoA
  • molecular weight:
    • 1084.06
  • Synonym(s):
    • trans-2,3-dihydro-docosenoyl-CoA
    • (2E)-docosenoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCCCCCCCCCCCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O" cannot be used as a page name in this wiki.




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