Difference between revisions of "GLYCERALD"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-FORMYLGLUTATHIONE-HYDROLASE-RXN S-FORMYLGLUTATHIONE-HYDROLASE-RXN] == * direction: ** LEFT-TO-RIG...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-LIGASE-ATP-RXN RNA-LIGASE-ATP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** gtp-bindi...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-FORMYLGLUTATHIONE-HYDROLASE-RXN S-FORMYLGLUTATHIONE-HYDROLASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-LIGASE-ATP-RXN RNA-LIGASE-ATP-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** s-formylglutathione_hydrolase
+
** gtp-binding_protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.2.12 EC-3.1.2.12]
+
** [http://enzyme.expasy.org/EC/6.5.1.3 EC-6.5.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-548]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[GLUTATHIONE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[3Prime-OH-Terminated-RNAs]][c] '''+''' 1 [[5-Phospho-RNA]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[RNAs]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 S-formylglutathione[c] '''=>''' 1 formate[c] '''+''' 1 glutathione[c] '''+''' 1 H+[c]
+
** 1 an [RNA]-3'-hydroxyl[c] '''+''' 1 a 5'-phospho-ribonucleoside-[RNA][c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 a ribonucleic acid[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10446]]
+
* [[Tiso_gene_8398]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
* [[Tiso_gene_8397]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_8396]]
 +
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-1801]], formaldehyde oxidation II (glutathione-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1801 PWY-1801]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
 
−
** [[pantograph]]:
 
−
*** [[esiliculosus]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14961 14961]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00527 R00527]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07640 R07640]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P00971 P00971]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=s-formylglutathione_hydrolase}}
+
{{#set: common name=gtp-binding_protein}}
−
{{#set: ec number=EC-3.1.2.12}}
+
{{#set: ec number=EC-6.5.1.3}}
−
{{#set: gene associated=Tiso_gene_10446}}
+
{{#set: gene associated=Tiso_gene_8398|Tiso_gene_8397|Tiso_gene_8396}}
−
{{#set: in pathway=PWY-1801}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:49, 10 January 2018

Reaction RNA-LIGASE-ATP-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • gtp-binding_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an [RNA]-3'-hydroxyl[c] + 1 a 5'-phospho-ribonucleoside-[RNA][c] + 1 ATP[c] => 1 diphosphate[c] + 1 a ribonucleic acid[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLYCERALD&oldid=14820"