Difference between revisions of "URIDINE-NUCLEOSIDASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_IODINE-MOLECULE ExchangeSeed_IODINE-MOLECULE] == * direction: ** REVERSIBLE * Synonym(...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSNACMURPENTATRANS-RXN PHOSNACMURPENTATRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_IODINE-MOLECULE ExchangeSeed_IODINE-MOLECULE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSNACMURPENTATRANS-RXN PHOSNACMURPENTATRANS-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.8.13 EC-2.7.8.13]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[IODINE-MOLECULE]][C-BOUNDARY] '''<=>''' 1.0 [[IODINE-MOLECULE]][e]
+
** 1 [[CPD-9646]][c] '''+''' 1 [[C1]][c] '''=>''' 1 [[C5]][c] '''+''' 1 [[UMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 I2[C-BOUNDARY] '''<=>''' 1.0 I2[e]
+
** 1 di-trans,octa-cis-undecaprenyl phosphate[c] '''+''' 1 UDP-N-acetyl-&alpha;-D-muramoyl-L-alanyl-&gamma;-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''=>''' 1 undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-&gamma;-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1 UMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_1604]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PEPTIDOGLYCANSYN-PWY]], peptidoglycan biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDOGLYCANSYN-PWY PEPTIDOGLYCANSYN-PWY]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* [[orthology]]:
−
** [[added to manage seeds from boundary to extracellular compartment]]
+
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: in pathway=}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28386 28386]
−
{{#set: reconstruction category=manual}}
+
* LIGAND-RXN:
−
{{#set: reconstruction source=added to manage seeds from boundary to extracellular compartment}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05630 R05630]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q55986 Q55986]
 +
** [http://www.uniprot.org/uniprot/P45062 P45062]
 +
** [http://www.uniprot.org/uniprot/Q03521 Q03521]
 +
** [http://www.uniprot.org/uniprot/O25235 O25235]
 +
** [http://www.uniprot.org/uniprot/Q9JSZ3 Q9JSZ3]
 +
** [http://www.uniprot.org/uniprot/Q9PI72 Q9PI72]
 +
** [http://www.uniprot.org/uniprot/P37585 P37585]
 +
** [http://www.uniprot.org/uniprot/P0A6W3 P0A6W3]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-2.7.8.13}}
 +
{{#set: gene associated=Tiso_gene_1604}}
 +
{{#set: in pathway=PEPTIDOGLYCANSYN-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:50, 10 January 2018

Reaction PHOSNACMURPENTATRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 di-trans,octa-cis-undecaprenyl phosphate[c] + 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] => 1 undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] + 1 UMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







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