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Line 1: |
Line 1: |
− | [[Category:Reaction]] | + | [[Category:Gene]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] == | + | == Gene Tiso_gene_7066 == |
− | * direction: | + | * left end position: |
− | ** LEFT-TO-RIGHT | + | ** 9953 |
− | * common name: | + | * transcription direction: |
− | ** ORF | + | ** NEGATIVE |
− | ** threonine_synthase | + | * right end position: |
− | * ec number: | + | ** 11382 |
− | ** [http://enzyme.expasy.org/EC/4.2.3.1 EC-4.2.3.1] | + | * centisome position: |
| + | ** 86.23289 |
| * Synonym(s): | | * Synonym(s): |
| | | |
− | == Reaction Formula == | + | == Reactions associated == |
− | * With identifiers: | + | * [[SERINE-O-ACETTRAN-RXN]] |
− | ** 1 [[WATER]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[THR]][c]
| + | ** in-silico_annotation |
− | * With common name(s): | + | ***ec-number |
− | ** 1 H2O[c] '''+''' 1 O-phospho-L-homoserine[c] '''=>''' 1 phosphate[c] '''+''' 1 L-threonine[c] | + | |
− | | + | |
− | == Genes associated with this reaction ==
| + | |
− | Genes have been associated with this reaction based on different elements listed below.
| + | |
− | * [[Tiso_gene_12871]]
| + | |
| ** [[pantograph]]-[[athaliana]] | | ** [[pantograph]]-[[athaliana]] |
| ** [[pantograph]]-[[synechocystis]] | | ** [[pantograph]]-[[synechocystis]] |
− | ** [[pantograph]]-[[creinhardtii]]
| |
− | * [[Tiso_gene_2614]]
| |
− | ** IN-SILICO_ANNOTATION
| |
− | ***EC-NUMBER
| |
− | * [[Tiso_gene_418]]
| |
− | ** IN-SILICO_ANNOTATION
| |
− | ***EC-NUMBER
| |
− | ** EXPERIMENTAL_ANNOTATION
| |
− | ***EC-NUMBER
| |
− | * [[Tiso_gene_419]]
| |
− | ** IN-SILICO_ANNOTATION
| |
− | ***EC-NUMBER
| |
| ** [[pantograph]]-[[esiliculosus]] | | ** [[pantograph]]-[[esiliculosus]] |
− | == Pathways ==
| + | ** [[pantograph]]-[[creinhardtii]] |
− | * [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY] | + | ** [[pantograph]]-[[creinhardtii]] |
− | ** '''2''' reactions found over '''2''' reactions in the full pathway
| + | == Pathways associated == |
− | == Reconstruction information ==
| + | * [[CYSTSYN-PWY]] |
− | * [[orthology]]:
| + | * [[PWY-7274]] |
− | ** [[pantograph]]: | + | * [[PWY-6936]] |
− | *** [[creinhardtii]]
| + | |
− | *** [[synechocystis]]
| + | |
− | *** [[esiliculosus]]
| + | |
− | *** [[athaliana]]
| + | |
− | * [[manual]]: | + | |
− | ** [[primary_network]]
| + | |
− | * [[annotation]]:
| + | |
− | ** [[pathwaytools]]:
| + | |
− | *** [[experimental_annotation]]
| + | |
− | *** [[in-silico_annotation]]
| + | |
| == External links == | | == External links == |
− | * RHEA:
| + | {{#set: left end position=9953}} |
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10840 10840]
| + | {{#set: transcription direction=NEGATIVE}} |
− | * LIGAND-RXN:
| + | {{#set: right end position=11382}} |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R01466 R01466]
| + | {{#set: centisome position=86.23289 }} |
− | * UNIPROT:
| + | {{#set: reaction associated=SERINE-O-ACETTRAN-RXN}} |
− | ** [http://www.uniprot.org/uniprot/P04990 P04990]
| + | {{#set: pathway associated=CYSTSYN-PWY|PWY-7274|PWY-6936}} |
− | ** [http://www.uniprot.org/uniprot/Q9Y9K2 Q9Y9K2]
| + | |
− | ** [http://www.uniprot.org/uniprot/O28953 O28953]
| + | |
− | ** [http://www.uniprot.org/uniprot/P66902 P66902]
| + | |
− | ** [http://www.uniprot.org/uniprot/O59293 O59293]
| + | |
− | ** [http://www.uniprot.org/uniprot/O66864 O66864]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9PPA8 Q9PPA8]
| + | |
− | ** [http://www.uniprot.org/uniprot/O58587 O58587]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9V0P1 Q9V0P1]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9V190 Q9V190]
| + | |
− | ** [http://www.uniprot.org/uniprot/O26354 O26354]
| + | |
− | ** [http://www.uniprot.org/uniprot/O29700 O29700]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9WZ16 Q9WZ16]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9UZV8 Q9UZV8]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9JU91 Q9JU91]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9CDV8 Q9CDV8]
| + | |
− | ** [http://www.uniprot.org/uniprot/P44503 P44503]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q58860 Q58860]
| + | |
− | ** [http://www.uniprot.org/uniprot/O66740 O66740]
| + | |
− | ** [http://www.uniprot.org/uniprot/O50114 O50114]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9YBW2 Q9YBW2]
| + | |
− | ** [http://www.uniprot.org/uniprot/P23669 P23669]
| + | |
− | ** [http://www.uniprot.org/uniprot/P27735 P27735]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q00063 Q00063]
| + | |
− | ** [http://www.uniprot.org/uniprot/P74193 P74193]
| + | |
− | ** [http://www.uniprot.org/uniprot/P73711 P73711]
| + | |
− | ** [http://www.uniprot.org/uniprot/P16120 P16120]
| + | |
− | ** [http://www.uniprot.org/uniprot/P00934 P00934]
| + | |
− | ** [http://www.uniprot.org/uniprot/P29363 P29363]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9S7B5 Q9S7B5]
| + | |
− | ** [http://www.uniprot.org/uniprot/P45837 P45837]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q42598 Q42598]
| + | |
− | {{#set: direction=LEFT-TO-RIGHT}} | + | |
− | {{#set: common name=ORF}} | + | |
− | {{#set: common name=threonine_synthase}} | + | |
− | {{#set: ec number=EC-4.2.3.1}} | + | |
− | {{#set: gene associated=Tiso_gene_12871|Tiso_gene_2614|Tiso_gene_418|Tiso_gene_419}} | + | |
− | {{#set: in pathway=HOMOSER-THRESYN-PWY}} | + | |
− | {{#set: reconstruction category=orthology}}
| + | |
− | {{#set: reconstruction tool=pantograph}}
| + | |
− | {{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
| + | |
− | {{#set: reconstruction category=manual}}
| + | |
− | {{#set: reconstruction source=primary_network}}
| + | |
− | {{#set: reconstruction category=annotation}}
| + | |
− | {{#set: reconstruction tool=pathwaytools}}
| + | |
− | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |