Difference between revisions of "RME298"

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(Created page with "Category:Gene == Gene Tiso_gene_5334 == * left end position: ** 10225 * transcription direction: ** POSITIVE * right end position: ** 10356 * centisome position: ** 51.534...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13677 RXN-13677] == * direction: ** LEFT-TO-RIGHT * common name: ** aminopeptidase_n ** membran...")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_5334 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13677 RXN-13677] ==
* left end position:
+
* direction:
** 10225
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
+
** aminopeptidase_n
* right end position:
+
** membrane_aminopeptidase_i
** 10356
+
* ec number:
* centisome position:
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** [http://enzyme.expasy.org/EC/3.4.11.2 EC-3.4.11.2]
** 51.5347   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[GLYCPDIESTER-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[CPD-14705]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-14706]][c] '''+''' 1 [[GLY]][c]
***ec-number
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* With common name(s):
* [[RXN-14073]]
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** 1 4-hydroxy-2-nonenal-[Cys-Gly] conjugate[c] '''+''' 1 H2O[c] '''=>''' 1 4-hydroxy-2-nonenal-[L-Cys] conjugate[c] '''+''' 1 glycine[c]
** in-silico_annotation
+
 
***ec-number
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== Genes associated with this reaction  ==
* [[RXN-14136]]
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Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
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* [[Tiso_gene_860]]
***ec-number
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** IN-SILICO_ANNOTATION
* [[RXN-14160]]
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***AUTOMATED-NAME-MATCH
** in-silico_annotation
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** [[pantograph]]-[[esiliculosus]]
***ec-number
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* [[Tiso_gene_16906]]
== Pathways associated ==
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** IN-SILICO_ANNOTATION
* [[PWY-7409]]
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***AUTOMATED-NAME-MATCH
* [[PWY-6952]]
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== Pathways  ==
 +
* [[PWY-7112]], 4-hydroxy-2-nonenal detoxification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7112 PWY-7112]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=10225}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=aminopeptidase_n}}
{{#set: right end position=10356}}
+
{{#set: common name=membrane_aminopeptidase_i}}
{{#set: centisome position=51.5347    }}
+
{{#set: ec number=EC-3.4.11.2}}
{{#set: reaction associated=GLYCPDIESTER-RXN|RXN-14073|RXN-14136|RXN-14160}}
+
{{#set: gene associated=Tiso_gene_860|Tiso_gene_16906}}
{{#set: pathway associated=PWY-7409|PWY-6952}}
+
{{#set: in pathway=PWY-7112}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:52, 10 January 2018

Reaction RXN-13677

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • aminopeptidase_n
    • membrane_aminopeptidase_i
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-hydroxy-2-nonenal-[Cys-Gly] conjugate[c] + 1 H2O[c] => 1 4-hydroxy-2-nonenal-[L-Cys] conjugate[c] + 1 glycine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7112, 4-hydroxy-2-nonenal detoxification: PWY-7112
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links