Difference between revisions of "Tiso gene 5336"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNITOL-1-PHOSPHATASE-RXN MANNITOL-1-PHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2581 == * left end position: ** 12617 * transcription direction: ** POSITIVE * right end position: ** 18752 * centisome position: ** 66.876...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNITOL-1-PHOSPHATASE-RXN MANNITOL-1-PHOSPHATASE-RXN] ==
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== Gene Tiso_gene_2581 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 12617
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* common name:
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* transcription direction:
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** mannitol-1-phosphatase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.1.3.22 EC-3.1.3.22]
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** 18752
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* centisome position:
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** 66.87692   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
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** 1 [[MANNITOL-1P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MANNITOL]][c] '''+''' 1 [[Pi]][c]
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** [[pantograph]]-[[athaliana]]
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 D-mannitol 1-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 D-mannitol[c] '''+''' 1 phosphate[c]
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* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2123]]
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** [[pantograph]]-[[creinhardtii]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[creinhardtii]]
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***EC-NUMBER
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* [[GLUTAMATESYN-RXN]]
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** EXPERIMENTAL_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***ec-number
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== Pathways ==
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** experimental_annotation
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* [[PWY-3881]], mannitol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3881 PWY-3881]
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***ec-number
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** '''1''' reactions found over '''3''' reactions in the full pathway
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** [[pantograph]]-[[athaliana]]
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* [[PWY-6531]], mannitol cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6531 PWY-6531]
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** [[pantograph]]-[[esiliculosus]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[GLUTAMIN-RXN]]
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== Reconstruction information  ==
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** in-silico_annotation
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* [[annotation]]:
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***ec-number
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** [[pathwaytools]]:
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** experimental_annotation
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*** [[experimental_annotation]]
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***ec-number
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*** [[in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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* [[GLUTDEHYD-RXN]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-12878]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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* [[GLUTAMINEFUM-PWY]]
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* [[GLUTAMINDEG-PWY]]
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* [[PWY-5913]]
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* [[PWY490-3]]
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* [[GLUTSYN-PWY]]
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* [[PWY-4341]]
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* [[PWY-5675]]
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* [[PWY-6549]]
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* [[PWY-6964]]
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* [[GLUGLNSYN-PWY]]
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* [[GLUTSYNIII-PWY]]
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* [[CITRULBIO-PWY]]
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* [[PWY-6963]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=12617}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19537 19537]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=18752}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02167 R02167]
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{{#set: centisome position=66.87692    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN|GLUTAMATE-SYNTHASE-NADH-RXN|GLUTAMATESYN-RXN|GLUTAMIN-RXN|GLUTDEHYD-RXN|RXN-12878}}
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{{#set: common name=mannitol-1-phosphatase}}
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{{#set: pathway associated=GLUTAMINEFUM-PWY|GLUTAMINDEG-PWY|PWY-5913|PWY490-3|GLUTSYN-PWY|PWY-4341|PWY-5675|PWY-6549|PWY-6964|GLUGLNSYN-PWY|GLUTSYNIII-PWY|CITRULBIO-PWY|PWY-6963}}
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{{#set: ec number=EC-3.1.3.22}}
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{{#set: gene associated=Tiso_gene_2123}}
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{{#set: in pathway=PWY-3881|PWY-6531}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:54, 10 January 2018

Gene Tiso_gene_2581

  • left end position:
    • 12617
  • transcription direction:
    • POSITIVE
  • right end position:
    • 18752
  • centisome position:
    • 66.87692
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5336&oldid=15175"