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| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8036 RXN-8036] == | + | == Gene Tiso_gene_16176 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** ORF
| + | |
| − | ** beta-glucosidase-like_chloroplastic
| + | |
| − | ** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
| + | |
| − | ** beta_glucosidase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]] |
| − | ** 1 [[CPD-7417]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-7418]][c] '''+''' 1 [[Glucopyranose]][c]
| + | |
| − | * With common name(s):
| + | |
| − | ** 1 cis-coumarinic acid-β-D-glucoside[c] '''+''' 1 H2O[c] '''=>''' 1 coumarinate[c] '''+''' 1 D-glucopyranose[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_6187]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_13306]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_2344]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_3467]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_15066]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_10001]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_507]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_6188]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_6497]]
| + | |
| | ** [[pantograph]]-[[esiliculosus]] | | ** [[pantograph]]-[[esiliculosus]] |
| − | * [[Tiso_gene_6007]] | + | * [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]] |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_8669]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_15067]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_13305]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_5836]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_2843]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| | ** [[pantograph]]-[[esiliculosus]] | | ** [[pantograph]]-[[esiliculosus]] |
| − | == Pathways == | + | == Pathways associated == |
| − | * [[PWY-5176]], coumarin biosynthesis (via 2-coumarate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176] | + | * [[PWY-7539]] |
| − | ** '''2''' reactions found over '''5''' reactions in the full pathway
| + | * [[PWY-6797]] |
| − | == Reconstruction information ==
| + | * [[PWY-6147]] |
| − | * [[orthology]]: | + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[athaliana]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: reaction associated=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN|H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31223 31223]
| + | {{#set: pathway associated=PWY-7539|PWY-6797|PWY-6147}} |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R04998 R04998]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=ORF}}
| + | |
| − | {{#set: common name=beta-glucosidase-like_chloroplastic}}
| + | |
| − | {{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
| + | |
| − | {{#set: common name=beta_glucosidase}} | + | |
| − | {{#set: ec number=EC-3.2.1.21}}
| + | |
| − | {{#set: gene associated=Tiso_gene_6187|Tiso_gene_13306|Tiso_gene_2344|Tiso_gene_3467|Tiso_gene_15066|Tiso_gene_10001|Tiso_gene_507|Tiso_gene_6188|Tiso_gene_6497|Tiso_gene_6007|Tiso_gene_8669|Tiso_gene_15067|Tiso_gene_13305|Tiso_gene_5836|Tiso_gene_2843}}
| + | |
| − | {{#set: in pathway=PWY-5176}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=athaliana|esiliculosus}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
