Difference between revisions of "MLTHFtm"

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(Created page with "Category:Gene == Gene Tiso_gene_8272 == * left end position: ** 4586 * transcription direction: ** POSITIVE * right end position: ** 7394 * centisome position: ** 44.12161...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7706 RXN-7706] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF *...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_8272 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7706 RXN-7706] ==
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* left end position:
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* direction:
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** 4586
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** polyketide_synthase
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* right end position:
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** ORF
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** 7394
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
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** 44.12161   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACOA120or]]
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* With identifiers:
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** [[pantograph]]-[[creinhardtii]]
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** 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7036]][c] '''=>''' 1 [[CPD-7037]][c] '''+''' 1 [[NAD]][c]
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* [[ACOA140or]]
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* With common name(s):
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** [[pantograph]]-[[creinhardtii]]
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** 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 3-methylthiopropanal[c] '''=>''' 1 methionol[c] '''+''' 1 NAD+[c]
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* [[ACOA160or]]
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** [[pantograph]]-[[creinhardtii]]
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== Genes associated with this reaction  ==
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* [[ACOA40or]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_6563]]
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* [[ACOA80or]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[creinhardtii]]
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***EC-NUMBER
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* [[ACYLCOADEHYDROG-RXN]]
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* [[Tiso_gene_7649]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***automated-name-match
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5424]]
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* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[esiliculosus]]
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***EC-NUMBER
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* [[PPCOAOm]]
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* [[Tiso_gene_5425]]
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** [[pantograph]]-[[creinhardtii]]
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** IN-SILICO_ANNOTATION
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* [[RXN-14193]]
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6562]]
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* [[RXN-14229]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[esiliculosus]]
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***EC-NUMBER
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* [[RXN-14262]]
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== Pathways  ==
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-5082]], L-methionine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5082 PWY-5082]
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* [[RXN-14264]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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** [[pantograph]]-[[athaliana]]
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== Reconstruction information  ==
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** [[pantograph]]-[[esiliculosus]]
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* [[annotation]]:
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* [[RXN-14278]]
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** [[pathwaytools]]:
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** [[pantograph]]-[[esiliculosus]]
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*** [[in-silico_annotation]]
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* [[RXN-17775]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17779]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17783]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17784]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17788]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17792]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17796]]
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** in-silico_annotation
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***automated-name-match
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== Pathways associated ==
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* [[FAO-PWY]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=4586}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=polyketide_synthase}}
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{{#set: right end position=7394}}
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{{#set: common name=ORF}}
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{{#set: centisome position=44.12161    }}
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{{#set: ec number=EC-1.1.1.1}}
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{{#set: reaction associated=ACOA120or|ACOA140or|ACOA160or|ACOA40or|ACOA80or|ACYLCOADEHYDROG-RXN|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|PPCOAOm|RXN-14193|RXN-14229|RXN-14262|RXN-14264|RXN-14278|RXN-17775|RXN-17779|RXN-17783|RXN-17784|RXN-17788|RXN-17792|RXN-17796}}
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{{#set: gene associated=Tiso_gene_6563|Tiso_gene_7649|Tiso_gene_5424|Tiso_gene_5425|Tiso_gene_6562}}
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{{#set: pathway associated=FAO-PWY}}
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{{#set: in pathway=PWY-5082}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:55, 10 January 2018

Reaction RXN-7706

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADH[c] + 1 H+[c] + 1 3-methylthiopropanal[c] => 1 methionol[c] + 1 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5082, L-methionine degradation III: PWY-5082
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=MLTHFtm&oldid=15274"