Difference between revisions of "CPD-7263"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17859 RXN-17859] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-_d...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17859 RXN-17859] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** acyl-_dehydrogenase
 +
** Acyl-CoA dehydrogenase
 +
** acyl-CoA_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.bu EC-2.3.1.bu]
+
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
 
* Synonym(s):
 
* Synonym(s):
 +
** fatty acyl coenzyme A dehydrogenase
 +
** acyl coenzyme A dehydrogenase
 +
** fatty-acyl-CoA dehydrogenase
 +
** general acyl CoA dehydrogenase
 +
** medium-chain acyl-coenzyme A dehydrogenase
 +
** long-chain acyl coenzyme A dehydrogenase
 +
** long-chain acyl-CoA dehydrogenase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[N-terminal-L-valine]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[N-Ac-N-terminal-L-valine]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an N-terminal L-valyl-[protein][c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 an N-terminal Nα-acetyl-L-valyl-[protein][c] '''+''' 1 coenzyme A[c] '''+''' 1 H+[c]
+
** 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''=>''' 1 a trans-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_7447]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_8271]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_14511]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_5449]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_6295]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_16631]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_10643]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_883]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_6475]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_16113]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_8272]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
+
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P16219 P16219]
 +
** [http://www.uniprot.org/uniprot/P45952 P45952]
 +
** [http://www.uniprot.org/uniprot/P15651 P15651]
 +
** [http://www.uniprot.org/uniprot/P11310 P11310]
 +
** [http://www.uniprot.org/uniprot/P08503 P08503]
 +
** [http://www.uniprot.org/uniprot/Q07417 Q07417]
 +
** [http://www.uniprot.org/uniprot/Q54857 Q54857]
 +
** [http://www.uniprot.org/uniprot/P45867 P45867]
 +
** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
 +
** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
 +
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.3.1.bu}}
+
{{#set: common name=acyl-_dehydrogenase}}
−
{{#set: in pathway=PWY-7800}}
+
{{#set: common name=Acyl-CoA dehydrogenase}}
 +
{{#set: common name=acyl-CoA_dehydrogenase}}
 +
{{#set: ec number=EC-1.3.8}}
 +
{{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
 +
{{#set: gene associated=Tiso_gene_7447|Tiso_gene_8271|Tiso_gene_14511|Tiso_gene_5449|Tiso_gene_6295|Tiso_gene_16631|Tiso_gene_10643|Tiso_gene_883|Tiso_gene_6475|Tiso_gene_16113|Tiso_gene_8272}}
 +
{{#set: in pathway=FAO-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:57, 10 January 2018

Reaction ACYLCOADEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-_dehydrogenase
    • Acyl-CoA dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):
    • fatty acyl coenzyme A dehydrogenase
    • acyl coenzyme A dehydrogenase
    • fatty-acyl-CoA dehydrogenase
    • general acyl CoA dehydrogenase
    • medium-chain acyl-coenzyme A dehydrogenase
    • long-chain acyl coenzyme A dehydrogenase
    • long-chain acyl-CoA dehydrogenase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links








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