Difference between revisions of "Tiso gene 11842"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-132 RXN1G-132] == * direction: ** LEFT-TO-RIGHT * common name: ** cis-delta21-3-oxo-C40:1-[ac...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-132 RXN1G-132] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** cis-delta21-3-oxo-C40:1-[acyl-carrier protein] synthase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.M1 EC-2.3.1.M1]
+
** [http://enzyme.expasy.org/EC/2.1.1.104 EC-2.1.1.104]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[cis-delta19-C38-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[cis-delta21-3-oxo-C40-ACPs]][c]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CAFFEOYL-COA]][c] '''=>''' 1 [[FERULOYL-COA]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a cis-delta19-C38:1-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a cis-delta21-3-oxo-C40:1-[acp][c]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 trans-caffeoyl-CoA[c] '''=>''' 1 feruloyl-CoA[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14485]]
+
* [[Tiso_gene_10561]]
−
** [[pantograph]]-[[esiliculosus]]
+
** [[pantograph]]-[[athaliana]]
−
* [[Tiso_gene_15991]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_19302]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_14561]]
 +
** [[pantograph]]-[[athaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
* [[PWY-6792]], scopoletin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6792 PWY-6792]
−
** '''86''' reactions found over '''182''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 +
** '''9''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-5710]], capsaicin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5710 PWY-5710]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6039]], chlorogenic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6039 PWY-6039]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
 +
** '''7''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[athaliana]]
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16925 16925]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01942 R01942]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P28034 P28034]
 +
** [http://www.uniprot.org/uniprot/O65307 O65307]
 +
** [http://www.uniprot.org/uniprot/Q42945 Q42945]
 +
** [http://www.uniprot.org/uniprot/O24144 O24144]
 +
** [http://www.uniprot.org/uniprot/O24149 O24149]
 +
** [http://www.uniprot.org/uniprot/O24150 O24150]
 +
** [http://www.uniprot.org/uniprot/O24151 O24151]
 +
** [http://www.uniprot.org/uniprot/O04899 O04899]
 +
** [http://www.uniprot.org/uniprot/O49499 O49499]
 +
** [http://www.uniprot.org/uniprot/Q9SVI7 Q9SVI7]
 +
** [http://www.uniprot.org/uniprot/Q40313 Q40313]
 +
** [http://www.uniprot.org/uniprot/Q43095 Q43095]
 +
** [http://www.uniprot.org/uniprot/O04854 O04854]
 +
** [http://www.uniprot.org/uniprot/O65162 O65162]
 +
** [http://www.uniprot.org/uniprot/O65362 O65362]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=cis-delta21-3-oxo-C40:1-[acyl-carrier protein] synthase}}
+
{{#set: ec number=EC-2.1.1.104}}
−
{{#set: ec number=EC-2.3.1.M1}}
+
{{#set: gene associated=Tiso_gene_10561|Tiso_gene_14561}}
−
{{#set: gene associated=Tiso_gene_14485|Tiso_gene_15991|Tiso_gene_19302}}
+
{{#set: in pathway=PWY-6792|PWY-1121|PWY-5710|PWY-7498|PWY-6039|PWY-7398|PWY-361}}
−
{{#set: in pathway=PWYG-321}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=athaliana|esiliculosus}}

Revision as of 16:58, 10 January 2018

Reaction CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6792, scopoletin biosynthesis: PWY-6792
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-5710, capsaicin biosynthesis: PWY-5710
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7498, phenylpropanoids methylation (ice plant): PWY-7498
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6039, chlorogenic acid biosynthesis I: PWY-6039
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7398, coumarins biosynthesis (engineered): PWY-7398
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-361, phenylpropanoid biosynthesis: PWY-361
    • 7 reactions found over 15 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11842&oldid=15527"