Difference between revisions of "RXN0-361"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACOA140or ACOA140or] == * direction: ** LEFT-TO-RIGHT * common name: ** Tetradecanoyl-CoA:(acceptor...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** serine_racemase ** t...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACOA140or ACOA140or] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Tetradecanoyl-CoA:(acceptor) 2,3-oxidoreductase
+
** ORF
 +
** serine_racemase
 +
** threonine_mitochondrial
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[TETRADECANOYL-COA]][x] '''+''' 1.0 [[FAD]][x] '''=>''' 1.0 [[CPD-15568]][x] '''+''' 1.0 [[FADH2]][x]
+
** 1 [[THR]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-15056]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 myristoyl-CoA[x] '''+''' 1.0 FAD[x] '''=>''' 1.0 2-trans-tetradecenoyl-CoA[x] '''+''' 1.0 FADH2[x]
+
** 1 L-threonine[c] '''=>''' 1 H+[c] '''+''' 1 H2O[c] '''+''' 1 (2Z)-2-aminobut-2-enoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8272]]
+
* [[Tiso_gene_12535]]
−
** [[pantograph]]-[[creinhardtii]]
+
** IN-SILICO_ANNOTATION
−
* [[Tiso_gene_18566]]
+
***EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
** EXPERIMENTAL_ANNOTATION
−
* [[Tiso_gene_16674]]
+
***EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_17967]]
+
* [[Tiso_gene_8525]]
−
** [[pantograph]]-[[creinhardtii]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_17207]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826]
 +
** '''4''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[creinhardtii]]
+
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Tetradecanoyl-CoA:(acceptor) 2,3-oxidoreductase}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_8272|Tiso_gene_18566|Tiso_gene_16674|Tiso_gene_17967}}
+
{{#set: common name=serine_racemase}}
−
{{#set: in pathway=}}
+
{{#set: common name=threonine_mitochondrial}}
 +
{{#set: gene associated=Tiso_gene_12535|Tiso_gene_8525|Tiso_gene_17207}}
 +
{{#set: in pathway=ILEUSYN-PWY|PWY-5826|PWY-5437}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:59, 10 January 2018

Reaction RXN-15122

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • serine_racemase
    • threonine_mitochondrial
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-threonine[c] => 1 H+[c] + 1 H2O[c] + 1 (2Z)-2-aminobut-2-enoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-5826, hypoglycin biosynthesis: PWY-5826
    • 4 reactions found over 14 reactions in the full pathway
  • PWY-5437, L-threonine degradation I: PWY-5437
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-361&oldid=15601"