|
|
| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.8-RXN 1.1.1.8-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Charged-VAL-tRNAs Charged-VAL-tRNAs] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** ORF | + | ** an L-valyl-[tRNAval] |
| − | ** glycerol-3-phosphate_dehydrogenase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/1.1.1.8 EC-1.1.1.8]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | == Reaction(s) known to produce the compound == |
| − | ** 1 [[NADH]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[GLYCEROL-3P]][c]
| + | * [[VALINE--TRNA-LIGASE-RXN]] |
| − | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
| − | ** 1 NADH[c] '''+''' 1 glycerone phosphate[c] '''+''' 1 H+[c] '''=>''' 1 NAD+[c] '''+''' 1 sn-glycerol 3-phosphate[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_13013]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | * [[Tiso_gene_15777]]
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_6069]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | * [[Tiso_gene_2810]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_2811]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_3718]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-6118]], glycerol-3-phosphate shuttle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6118 PWY-6118]
| + | |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | * [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
| + | |
| − | ** '''5''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-7411]], phosphatidate biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7411 PWY-7411]
| + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[creinhardtii]]
| + | |
| − | *** [[synechocystis]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN:
| + | {{#set: common name=an L-valyl-[tRNAval]}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00842 R00842]
| + | {{#set: produced by=VALINE--TRNA-LIGASE-RXN}} |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P13707 P13707]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P08507 P08507]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O25614 O25614]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JWH0 Q9JWH0]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43798 P43798]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O29390 O29390]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P46919 P46919]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P07735 P07735]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P13706 P13706]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q00055 Q00055]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P34517 P34517]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A6S7 P0A6S7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P21695 P21695]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41911 P41911]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P90593 P90593]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=ORF}} | + | |
| − | {{#set: common name=glycerol-3-phosphate_dehydrogenase}}
| + | |
| − | {{#set: ec number=EC-1.1.1.8}} | + | |
| − | {{#set: gene associated=Tiso_gene_13013|Tiso_gene_15777|Tiso_gene_6069|Tiso_gene_2810|Tiso_gene_2811|Tiso_gene_3718}}
| + | |
| − | {{#set: in pathway=PWY-6118|PWY-7385|PWY-7411}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
