Difference between revisions of "Tiso gene 2906"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18302 RXN-18302] == * direction: ** LEFT-TO-RIGHT * common name: ** digalactosyldiacylglycerol_...")
 
(Created page with "Category:Gene == Gene Tiso_gene_5838 == * left end position: ** 1939 * transcription direction: ** POSITIVE * right end position: ** 3410 * centisome position: ** 15.06136...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18302 RXN-18302] ==
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== Gene Tiso_gene_5838 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1939
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* common name:
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* transcription direction:
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** digalactosyldiacylglycerol_synthase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.4.1.241 EC-2.4.1.241]
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** 3410
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* centisome position:
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** 15.061363   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[MERCAPYSTRANS-RXN]]
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** 1 [[CPD-14553]][c] '''+''' 1 [[A-GALACTOSYLCERAMIDE]][c] '''=>''' 1 [[Digalactosylceramides]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 UDP-α-D-galactose[c] '''+''' 1 a β-D-galactosyl-N-acylsphingosine[c] '''=>''' 1 a digalactosylceramide[c] '''+''' 1 UDP[c] '''+''' 1 H+[c]
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** experimental_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
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* [[RXN0-6359]]
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Genes have been associated with this reaction based on different elements listed below.
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** experimental_annotation
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* [[Tiso_gene_2142]]
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***automated-name-match
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[esiliculosus]]
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***EC-NUMBER
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* [[RXN0-6385]]
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* [[Tiso_gene_11479]]
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** experimental_annotation
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** EXPERIMENTAL_ANNOTATION
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***automated-name-match
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***EC-NUMBER
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* [[THIOSULFATE-SULFURTRANSFERASE-RXN]]
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* [[Tiso_gene_106]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***automated-name-match
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Pathways associated ==
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* [[PWY-7840]], gala-series glycosphingolipids biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7840 PWY-7840]
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* [[PWY-5329]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5350]]
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=1939}}
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{{#set: common name=digalactosyldiacylglycerol_synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.4.1.241}}
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{{#set: right end position=3410}}
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{{#set: gene associated=Tiso_gene_2142|Tiso_gene_11479|Tiso_gene_106}}
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{{#set: centisome position=15.061363    }}
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{{#set: in pathway=PWY-7840}}
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{{#set: reaction associated=MERCAPYSTRANS-RXN|RXN0-6359|RXN0-6385|THIOSULFATE-SULFURTRANSFERASE-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-5329|PWY-5350}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:00, 10 January 2018

Gene Tiso_gene_5838

  • left end position:
    • 1939
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3410
  • centisome position:
    • 15.061363
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2906&oldid=15666"