Difference between revisions of "CPD-12724"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1104 RXN-1104] == * direction: ** LEFT-TO-RIGHT * common name: ** caffeate_o-methyltransferase...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5226 RXN0-5226] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-hexosaminidase * ec nu...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1104 RXN-1104] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5226 RXN0-5226] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** caffeate_o-methyltransferase
+
** beta-hexosaminidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
+
** [http://enzyme.expasy.org/EC/3.2.1.52 EC-3.2.1.52]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-676]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FERULIC-ACID]][c]
+
** 1 [[CPD0-1081]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[CPD0-882]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 trans-caffeate[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 ferulate[c]
+
** 1 N-acetyl-β-D-glucosamine(anhydrous)-N-acetylmuramate[c] '''+''' 1 H2O[c] '''=>''' 1 N-acetyl-β-D-glucosamine[c] '''+''' 1 1,6-anhydro-N-acetyl-β-muramate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18971]]
+
* [[Tiso_gene_14122]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
* [[Tiso_gene_18257]]
+
* [[Tiso_gene_1129]]
−
** [[pantograph]]-[[esiliculosus]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-2181]], free phenylpropanoid acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181]
+
* [[PWY0-1261]], anhydromuropeptides recycling: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1261 PWY0-1261]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
+
−
** '''9''' reactions found over '''19''' reactions in the full pathway
+
−
* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
+
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7186]], superpathway of scopolin and esculin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7186 PWY-7186]
 
−
** '''2''' reactions found over '''14''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
 
−
** [[pantograph]]:
 
−
*** [[esiliculosus]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20225 20225]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03366 R03366]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q41086 Q41086]
 
−
** [http://www.uniprot.org/uniprot/P28002 P28002]
 
−
** [http://www.uniprot.org/uniprot/Q00763 Q00763]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=caffeate_o-methyltransferase}}
+
{{#set: common name=beta-hexosaminidase}}
−
{{#set: ec number=EC-2.1.1.68}}
+
{{#set: ec number=EC-3.2.1.52}}
−
{{#set: gene associated=Tiso_gene_18971|Tiso_gene_18257}}
+
{{#set: gene associated=Tiso_gene_14122|Tiso_gene_1129}}
−
{{#set: in pathway=PWY-2181|PWY-1121|PWY-7498|PWY-7186}}
+
{{#set: in pathway=PWY0-1261}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:00, 10 January 2018

Reaction RXN0-5226

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • beta-hexosaminidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 N-acetyl-β-D-glucosamine(anhydrous)-N-acetylmuramate[c] + 1 H2O[c] => 1 N-acetyl-β-D-glucosamine[c] + 1 1,6-anhydro-N-acetyl-β-muramate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1261, anhydromuropeptides recycling: PWY0-1261
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-12724&oldid=15677"