Difference between revisions of "RXN-11840"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridinesynthase...")
 
(Created page with "Category:Gene == Gene Tiso_gene_15049 == * left end position: ** 370 * transcription direction: ** POSITIVE * right end position: ** 2263 * centisome position: ** 3.731719...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] ==
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== Gene Tiso_gene_15049 ==
* direction:
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* left end position:
** LEFT-TO-RIGHT
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** 370
* common name:
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* transcription direction:
** trna_pseudouridinesynthase
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** POSITIVE
** trna_pseudouridine_synthase
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* right end position:
* ec number:
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** 2263
** [http://enzyme.expasy.org/EC/5.4.99.26 EC-5.4.99.26]
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* centisome position:
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** 3.7317197   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[AGPT]]
** 1 [[tRNA-uridine65]][c] '''=>''' 1 [[tRNA-pseudouridine65]][c]
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** [[pantograph]]-[[creinhardtii]]
* With common name(s):
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* [[ATDGM]]
** 1 a uridine65 in tRNA[c] '''=>''' 1 a pseudouridine65 in tRNA[c]
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** [[pantograph]]-[[creinhardtii]]
 
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* [[GUANYL-KIN-RXN]]
== Genes associated with this reaction  ==
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** in-silico_annotation
Genes have been associated with this reaction based on different elements listed below.
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***ec-number
* [[Tiso_gene_9833]]
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** [[pantograph]]-[[athaliana]]
** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[synechocystis]]
***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
* [[Tiso_gene_4021]]
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== Pathways associated ==
** IN-SILICO_ANNOTATION
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* [[PWY-7221]]
***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_18959]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4020]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_19622]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2988]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_11913]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=370}}
{{#set: common name=trna_pseudouridinesynthase}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=trna_pseudouridine_synthase}}
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{{#set: right end position=2263}}
{{#set: ec number=EC-5.4.99.26}}
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{{#set: centisome position=3.7317197    }}
{{#set: gene associated=Tiso_gene_9833|Tiso_gene_4021|Tiso_gene_18959|Tiso_gene_4020|Tiso_gene_19622|Tiso_gene_2988|Tiso_gene_11913}}
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{{#set: reaction associated=AGPT|ATDGM|GUANYL-KIN-RXN}}
{{#set: in pathway=}}
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{{#set: pathway associated=PWY-7221}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 17:00, 10 January 2018

Gene Tiso_gene_15049

  • left end position:
    • 370
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2263
  • centisome position:
    • 3.7317197
  • Synonym(s):

Reactions associated

Pathways associated

External links