Difference between revisions of "RXN-16788"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MERCURY-II-REDUCTASE-RXN MERCURY-II-REDUCTASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERILEU-RXN BRANCHED-CHAINAMINOTRANSFERILEU-RXN] == * direction: ** REVERSI...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MERCURY-II-REDUCTASE-RXN MERCURY-II-REDUCTASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERILEU-RXN BRANCHED-CHAINAMINOTRANSFERILEU-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** mercuric_reductase
+
** branched-chain_amino_acid_aminotransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.16.1.1 EC-1.16.1.1]
+
** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[HG+2]][c] '''=>''' 1 [[HG0]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[ILE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[2-KETO-3-METHYL-VALERATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 Hg2+[c] '''=>''' 1 Hg0[c] '''+''' 1 NADP+[c] '''+''' 1 H+[c]
+
** 1 L-isoleucine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 (S)-3-methyl-2-oxopentanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3724]]
+
* [[Tiso_gene_14984]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_18403]]
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_17748]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[P641-PWY]], phenylmercury acetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=P641-PWY P641-PWY]
+
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5108]], L-isoleucine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5108 PWY-5108]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5078]], L-isoleucine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[synechocystis]]
 +
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[manual]]:
 +
** [[primary_network]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23856 23856]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24801 24801]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02807 R02807]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02199 R02199]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P08662 P08662]
+
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
−
** [http://www.uniprot.org/uniprot/P0A0E5 P0A0E5]
+
** [http://www.uniprot.org/uniprot/P38891 P38891]
−
** [http://www.uniprot.org/uniprot/P16171 P16171]
+
** [http://www.uniprot.org/uniprot/P47176 P47176]
−
** [http://www.uniprot.org/uniprot/P17239 P17239]
+
** [http://www.uniprot.org/uniprot/O86505 O86505]
−
** [http://www.uniprot.org/uniprot/P08332 P08332]
+
** [http://www.uniprot.org/uniprot/O14370 O14370]
−
** [http://www.uniprot.org/uniprot/P00392 P00392]
+
** [http://www.uniprot.org/uniprot/O32954 O32954]
−
** [http://www.uniprot.org/uniprot/P30341 P30341]
+
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
−
** [http://www.uniprot.org/uniprot/Q9S0Y8 Q9S0Y8]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/O86216 O86216]
+
{{#set: common name=branched-chain_amino_acid_aminotransferase}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: ec number=EC-2.6.1.42}}
−
{{#set: common name=mercuric_reductase}}
+
{{#set: gene associated=Tiso_gene_14984|Tiso_gene_18403|Tiso_gene_17748}}
−
{{#set: ec number=EC-1.16.1.1}}
+
{{#set: in pathway=ILEUSYN-PWY|ILEUDEG-PWY|PWY-5108|PWY-5103|PWY-5101|PWY-5078|PWY-5104}}
−
{{#set: gene associated=Tiso_gene_3724}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=P641-PWY}}
+
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:05, 10 January 2018

Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • branched-chain_amino_acid_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • ILEUDEG-PWY, L-isoleucine degradation I: ILEUDEG-PWY
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-5108, L-isoleucine biosynthesis V: PWY-5108
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5103, L-isoleucine biosynthesis III: PWY-5103
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5101, L-isoleucine biosynthesis II: PWY-5101
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5078, L-isoleucine degradation II: PWY-5078
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5104, L-isoleucine biosynthesis IV: PWY-5104
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16788&oldid=16129"