Difference between revisions of "RXN-10994"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-316 CPD-316] == * smiles: ** CC1(=C(C=C2(C(=C1)NC3(C(N2CC(O)C(O)C(O)CO)=NC(NC3=O)=O)))C) *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.224-RXN 2.4.1.224-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** exostosin-1 ** prob...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-316 CPD-316] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.224-RXN 2.4.1.224-RXN] ==
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* smiles:
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* direction:
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** CC1(=C(C=C2(C(=C1)NC3(C(N2CC(O)C(O)C(O)CO)=NC(NC3=O)=O)))C)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=UTKDOUCGQVLJIN-PIGZVRMJSA-N
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* common name:
 
* common name:
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** reduced riboflavin
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** exostosin-1
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* molecular weight:
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** probable_glycosyltransferase
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** 378.384   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.224 EC-2.4.1.224]
 
* Synonym(s):
 
* Synonym(s):
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** 4a,5-dihydroriboflavine
 
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** 7,8-dimethyl-10-(D-ribo-2,3,4,5-tetrahydroxypentyl)-4a,5-dihydroisoalloxazine
 
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** 7,8-dimethyl-10-(D-ribo-2,3,4,5-tetrahydroxypentyl)-5,10-dihydrobenzo[g]pteridine-2,4(3H,4aH)-dione
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-12445]]
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** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''=>''' 1 [[GlcNAc-GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Core]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c]
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* [[NADPH-DEHYDROGENASE-FLAVIN-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 UDP-N-acetyl-α-D-glucosamine[c] '''+''' 1 a [protein]-3-O-(β-D-GlcA-(1→3)-α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''=>''' 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6495]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6496]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45480537 45480537]
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** [http://www.genome.jp/dbget-bin/www_bget?R07334 R07334]
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* HMDB : HMDB01557
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=exostosin-1}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01007 C01007]
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{{#set: common name=probable_glycosyltransferase}}
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* CHEMSPIDER:
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{{#set: ec number=EC-2.4.1.224}}
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** [http://www.chemspider.com/Chemical-Structure.52885.html 52885]
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{{#set: gene associated=Tiso_gene_6495|Tiso_gene_6496}}
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* CHEBI:
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{{#set: in pathway=PWY-6558}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=8798 8798]
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{{#set: reconstruction category=annotation}}
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* BIGG : rbflvrd
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=CC1(=C(C=C2(C(=C1)NC3(C(N2CC(O)C(O)C(O)CO)=NC(NC3=O)=O)))C)}}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: inchi key=InChIKey=UTKDOUCGQVLJIN-PIGZVRMJSA-N}}
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{{#set: common name=reduced riboflavin}}
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{{#set: molecular weight=378.384    }}
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{{#set: common name=4a,5-dihydroriboflavine|7,8-dimethyl-10-(D-ribo-2,3,4,5-tetrahydroxypentyl)-4a,5-dihydroisoalloxazine|7,8-dimethyl-10-(D-ribo-2,3,4,5-tetrahydroxypentyl)-5,10-dihydrobenzo[g]pteridine-2,4(3H,4aH)-dione}}
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{{#set: produced by=RXN-12445|NADPH-DEHYDROGENASE-FLAVIN-RXN}}
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Revision as of 18:07, 10 January 2018

Reaction 2.4.1.224-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • exostosin-1
    • probable_glycosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6558, heparan sulfate biosynthesis (late stages): PWY-6558
    • 3 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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