Difference between revisions of "CPD-9646"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLATECYC-RXN ADENYLATECYC-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** adenylate_cyc...")
 
(Created page with "Category:Gene == Gene Tiso_gene_12778 == * left end position: ** 62 * transcription direction: ** POSITIVE * right end position: ** 6172 * centisome position: ** 0.9228937...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLATECYC-RXN ADENYLATECYC-RXN] ==
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== Gene Tiso_gene_12778 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 62
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* common name:
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* transcription direction:
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** adenylate_cyclase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.6.1.1 EC-4.6.1.1]
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** 6172
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* centisome position:
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** 0.92289376   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[3-ISOPROPYLMALISOM-RXN]]
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** 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CAMP]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 cyclic-AMP[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13108]]
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* [[HOMOACONITATE-HYDRATASE-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-13163]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-13722]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-8991]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8950]]
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== Pathways associated ==
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** [[pantograph]]-[[creinhardtii]]
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* [[PWY-3081]]
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* [[Tiso_gene_9251]]
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* [[LYSINE-AMINOAD-PWY]]
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** IN-SILICO_ANNOTATION
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* [[P241-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[LEUSYN-PWY]]
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* [[Tiso_gene_1107]]
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* [[PWY-6871]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16074]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_34]]
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** [[pantograph]]-[[creinhardtii]]
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−
* [[Tiso_gene_16294]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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−
* [[Tiso_gene_16143]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
* [[Tiso_gene_17342]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_10744]]
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** IN-SILICO_ANNOTATION
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−
***AUTOMATED-NAME-MATCH
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−
* [[Tiso_gene_16542]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14301]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6404]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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−
* [[Tiso_gene_15744]]
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−
** IN-SILICO_ANNOTATION
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−
***AUTOMATED-NAME-MATCH
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−
* [[Tiso_gene_6871]]
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−
** IN-SILICO_ANNOTATION
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−
***AUTOMATED-NAME-MATCH
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−
* [[Tiso_gene_5483]]
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−
** IN-SILICO_ANNOTATION
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−
***AUTOMATED-NAME-MATCH
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−
* [[Tiso_gene_10495]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
* [[Tiso_gene_9865]]
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−
** IN-SILICO_ANNOTATION
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−
***AUTOMATED-NAME-MATCH
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−
== Pathways  ==
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−
== Reconstruction information  ==
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* [[orthology]]:
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−
** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=62}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15389 15389]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6172}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00089 R00089]
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{{#set: centisome position=0.92289376    }}
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* UNIPROT:
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{{#set: reaction associated=3-ISOPROPYLMALISOM-RXN|HOMOACONITATE-HYDRATASE-RXN|RXN-13163|RXN-13722|RXN-8991}}
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** [http://www.uniprot.org/uniprot/P14605 P14605]
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{{#set: pathway associated=PWY-3081|LYSINE-AMINOAD-PWY|P241-PWY|LEUSYN-PWY|PWY-6871}}
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** [http://www.uniprot.org/uniprot/Q05766 Q05766]
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** [http://www.uniprot.org/uniprot/P21932 P21932]
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** [http://www.uniprot.org/uniprot/P19754 P19754]
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** [http://www.uniprot.org/uniprot/P26769 P26769]
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** [http://www.uniprot.org/uniprot/P26770 P26770]
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** [http://www.uniprot.org/uniprot/Q03343 Q03343]
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** [http://www.uniprot.org/uniprot/Q01341 Q01341]
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** [http://www.uniprot.org/uniprot/P40134 P40134]
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** [http://www.uniprot.org/uniprot/P40146 P40146]
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** [http://www.uniprot.org/uniprot/P51829 P51829]
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** [http://www.uniprot.org/uniprot/P49606 P49606]
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** [http://www.uniprot.org/uniprot/P0A1A7 P0A1A7]
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** [http://www.uniprot.org/uniprot/P19485 P19485]
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** [http://www.uniprot.org/uniprot/Q03100 Q03100]
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** [http://www.uniprot.org/uniprot/P32870 P32870]
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** [http://www.uniprot.org/uniprot/Q08462 Q08462]
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** [http://www.uniprot.org/uniprot/P43524 P43524]
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** [http://www.uniprot.org/uniprot/Q44561 Q44561]
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** [http://www.uniprot.org/uniprot/P51830 P51830]
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** [http://www.uniprot.org/uniprot/Q01513 Q01513]
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** [http://www.uniprot.org/uniprot/P40136 P40136]
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** [http://www.uniprot.org/uniprot/P15318 P15318]
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** [http://www.uniprot.org/uniprot/P08678 P08678]
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** [http://www.uniprot.org/uniprot/P23466 P23466]
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** [http://www.uniprot.org/uniprot/P00936 P00936]
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** [http://www.uniprot.org/uniprot/P27580 P27580]
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** [http://www.uniprot.org/uniprot/P40145 P40145]
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** [http://www.uniprot.org/uniprot/P26338 P26338]
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** [http://www.uniprot.org/uniprot/P40130 P40130]
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** [http://www.uniprot.org/uniprot/P30528 P30528]
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** [http://www.uniprot.org/uniprot/Q9QW33 Q9QW33]
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** [http://www.uniprot.org/uniprot/P72951 P72951]
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** [http://www.uniprot.org/uniprot/P40138 P40138]
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** [http://www.uniprot.org/uniprot/Q9VW60 Q9VW60]
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** [http://www.uniprot.org/uniprot/O96306 O96306]
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** [http://www.uniprot.org/uniprot/Q9Z286 Q9Z286]
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** [http://www.uniprot.org/uniprot/O76229 O76229]
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−
** [http://www.uniprot.org/uniprot/O77079 O77079]
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** [http://www.uniprot.org/uniprot/O96762 O96762]
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−
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=adenylate_cyclase}}
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{{#set: ec number=EC-4.6.1.1}}
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−
{{#set: gene associated=Tiso_gene_13108|Tiso_gene_8950|Tiso_gene_9251|Tiso_gene_1107|Tiso_gene_16074|Tiso_gene_34|Tiso_gene_16294|Tiso_gene_16143|Tiso_gene_17342|Tiso_gene_10744|Tiso_gene_16542|Tiso_gene_14301|Tiso_gene_6404|Tiso_gene_15744|Tiso_gene_6871|Tiso_gene_5483|Tiso_gene_10495|Tiso_gene_9865}}
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−
{{#set: in pathway=}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:09, 10 January 2018

Gene Tiso_gene_12778

  • left end position:
    • 62
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6172
  • centisome position:
    • 0.92289376
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-9646&oldid=16451"