Difference between revisions of "LINAMARIN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLNEURAMINATE N-ACETYLNEURAMINATE] == * common name: ** N-acetylneuraminate * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8162 RXN-8162] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * Synonym...")
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLNEURAMINATE N-ACETYLNEURAMINATE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8162 RXN-8162] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** N-acetylneuraminate
+
** polyketide_synthase
 
* Synonym(s):
 
* Synonym(s):
** sialic acid
 
** NANA
 
** O-sialic acid
 
** sialate
 
** N-acetylneuraminic acid
 
** Neu5Ac
 
** 5-acetamido-3,5-dideoxy-D-glycero-D-galacto-2-nonulosonic acid
 
** 5-acetamido-3,5-dideoxy-D-glycero-D-galacto-non-2-ulopyranosonic acid
 
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
== Reaction(s) known to produce the compound ==
+
* With identifiers:
* [[3.2.1.18-RXN]]
+
** 1 [[CPD-7682]][c] '''+''' 1 [[NAD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[CPD-468]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
* [[RXN-13182]]
+
* With common name(s):
* [[RXN-13181]]
+
** 1 (S)-2,3,4,5-tetrahydropiperidine-2-carboxylate[c] '''+''' 1 NAD+[c] '''+''' 2 H2O[c] '''=>''' 1 L-2-aminoadipate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
* [[SIALATE-O-ACETYLESTERASE-RXN]]
+
 
== Reaction(s) of unknown directionality ==
+
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_6563]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-5283]], L-lysine degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5283 PWY-5283]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5298]], L-lysine degradation VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5298 PWY-5298]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: common name=N-acetylneuraminate}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=sialic acid|NANA|O-sialic acid|sialate|N-acetylneuraminic acid|Neu5Ac|5-acetamido-3,5-dideoxy-D-glycero-D-galacto-2-nonulosonic acid|5-acetamido-3,5-dideoxy-D-glycero-D-galacto-non-2-ulopyranosonic acid}}
+
{{#set: common name=polyketide_synthase}}
{{#set: produced by=3.2.1.18-RXN|RXN-13182|RXN-13181|SIALATE-O-ACETYLESTERASE-RXN}}
+
{{#set: gene associated=Tiso_gene_6563}}
 +
{{#set: in pathway=PWY-5283|PWY-5298}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 18:10, 10 January 2018

Reaction RXN-8162

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-2,3,4,5-tetrahydropiperidine-2-carboxylate[c] + 1 NAD+[c] + 2 H2O[c] => 1 L-2-aminoadipate[c] + 1 H+[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5283, L-lysine degradation V: PWY-5283
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-5298, L-lysine degradation VI: PWY-5298
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links